Gene Shewana3_3310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3310 
Symbol 
ID4477611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3972415 
End bp3973605 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content51% 
IMG OID639727920 
ProductFAD dependent oxidoreductase 
Protein accessionYP_870940 
Protein GI117921748 
COG category[C] Energy production and conversion 
COG ID[COG0578] Glycerol-3-phosphate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAG CCGATATGAG TTCATACGAT ATTGCGATTA TCGGTGGTGG GATCAGCGGT 
GTCGGTATCG CCCAATACGC AGCGGCGGCG GGGTATTCGA CCCTGCTTAT CGAAAAAGGT
GAGATTGGCG GCCAAACCTC GGCCAATTCC AGCAAGTTGA TCCACGGTGG GTTGCGATAT
CTTGAAAGCG GGCAAGTGAA CCTTGTGCGC AAATCCTTGC AGGAGCGGCG CCATTTGCTC
GACTTCGCGC CAAGCTTAGT CAAAGCCGTA CCTTTTTACA TTCCCGTCTA TCAAGACAGT
CAGCGTAACC CTTGGACGAT TCGGGCGGGC TTGAGTCTGT ACGCGCTACT CAGTGAATTT
GATCCGCTTG GCCGCTTTGT ATCTATTCCC GCCGTGCATT GGCATCGTTT TAACGGGCTT
AAACTCCAAG GTTTGAAGGC CGTGTTCCAG TATTGGGACG CGCAAACCGA CGATAAATTG
CTGACCCAAG CGGTGGCCCG TAGTGCCGAG GCATTGGGCG CCCATGTGTA TGCCGAGGCG
GAGTTTTTAC AGCTCAATCA TCTGAGTGAG CAGATTGACC TAAGTTTTCG CCTTCGCGGC
GAAGTGCAAC AGATTGACGC TAAGCTGGTG ATAAATGCCG CCGGTCCTTG GGTGAATGAG
GTGATAGCAA AGGTGTCACC GCCACTGGCT GGAGTTGAAC TGGATTGGGT GCAGGGCGCA
CATTTGCTGC TGGACTTACC CGCCCCCGAC GGCATCTTAT ATTTAGAATC TTGCTTCGAT
AAGCGGGTGA TTTTTGTGAT GCCTTGGTAT GGTCAAATGC TAATTGGCAC CACGGAAACC
GAGTTAACAT CCTTAGATTC ACCGCCCCAA GTAACTGAGT CTGAAATTAA TTATCTCTTA
GGCATTTATC GGCACTACTT TCCACTGTCG GCCTCGATTG ATGAACTCAA AACCAAGATA
GTGCAGACCT TTTGCGGCGT GAGGGTATTA CCTAAGCAAG CGAGCTCTGC CTTTGAGCGC
CCAAGGGATA CCCTAATGCA AACCTCGATT TCTCACCCGA GATTACTGAG TCTTTACGGC
GGCAAGCTCA CAACTTTTAG GAGTACCTCG GCCGAAGTGC TTGAGTGGGT TGAACAAAAA
CTCGGAAAAC GCACTCCCAT CGCCGATATA GATAGCCTGA GATTAAGTTA A
 
Protein sequence
MDKADMSSYD IAIIGGGISG VGIAQYAAAA GYSTLLIEKG EIGGQTSANS SKLIHGGLRY 
LESGQVNLVR KSLQERRHLL DFAPSLVKAV PFYIPVYQDS QRNPWTIRAG LSLYALLSEF
DPLGRFVSIP AVHWHRFNGL KLQGLKAVFQ YWDAQTDDKL LTQAVARSAE ALGAHVYAEA
EFLQLNHLSE QIDLSFRLRG EVQQIDAKLV INAAGPWVNE VIAKVSPPLA GVELDWVQGA
HLLLDLPAPD GILYLESCFD KRVIFVMPWY GQMLIGTTET ELTSLDSPPQ VTESEINYLL
GIYRHYFPLS ASIDELKTKI VQTFCGVRVL PKQASSAFER PRDTLMQTSI SHPRLLSLYG
GKLTTFRSTS AEVLEWVEQK LGKRTPIADI DSLRLS