Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3303 |
Symbol | |
ID | 4477604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3961055 |
End bp | 3961774 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639727913 |
Product | integrase catalytic subunit |
Protein accession | YP_870933 |
Protein GI | 117921741 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAAACGG TACAATATGA ACGGTTATTT CAACCGCGAG TCGGTACGCG TAAACTGCAG TATTTACTCA ACAAAATGCA TCAAATAGTG ATAGGACGAG ACCGGTTATT TCGCTGTCTT AGGGCGCATC GTTTGTTGGT CACGCCGAAA CGGGCGTACC ATAAAACGAC CCATAGCCAT CATCGATTTA GGTGTCATCC CAACTTGCTT AAGCCCAGTG AGCAGCAAGT GGACATCAGC CGCTCAGAAC AAGTCTGGGT GGCTGATATT ACCTATCTGT CACTGCAAGA TAATGAAGCC TATTTAAGCT TGGTGACCGA TGCCTGGTCA CGAAAAATTG TGGGTTATCA TGTTGATGAT AATCTTAAAA CAGACGGGGT GCTAACGGCT TACAAACGGG CACTGAGACA GCGACAAGAT AAAAGTAAAC CGCTGATACA CCACTCAGAC CGAGGGATAC AGTACTGCTC AAACGCGTAT CAAGCGGTTC ACGCACAACA TGGCGTGACA TGCTCAATGA CAGACGGATA TGACTGCTAT CAAAATGCCT TAGCAGAGCG AGTGAATGGC ATCTTGAAGC AGGAGTTTTT AACACATAAG CCCGCAACGC TGGAGGAGGC GCGACAAATG GTGGCAGAAG CGGTTGCCAT CTATAATCAA CGACGGCCAC ATTTGGCCTT AAAATACAAA ACGCCCGATG AGGTTCATCG AGCGTTTTAG
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Protein sequence | MQTVQYERLF QPRVGTRKLQ YLLNKMHQIV IGRDRLFRCL RAHRLLVTPK RAYHKTTHSH HRFRCHPNLL KPSEQQVDIS RSEQVWVADI TYLSLQDNEA YLSLVTDAWS RKIVGYHVDD NLKTDGVLTA YKRALRQRQD KSKPLIHHSD RGIQYCSNAY QAVHAQHGVT CSMTDGYDCY QNALAERVNG ILKQEFLTHK PATLEEARQM VAEAVAIYNQ RRPHLALKYK TPDEVHRAF
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