| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3298 |
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| Symbol | |
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| ID | 4477599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3947973 |
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| End bp | 3952271 |
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| Gene Length | 4299 bp |
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| Protein Length | 1432 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639727908 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_870928 |
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| Protein GI | 117921736 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGAAC TTAAAATCGA CAATCACAGC GTCACGGCCG AGCCGAACGA TAACCTATTA
CAGGCGGCCC GTAAGGCGGG CATAGCCATT CCGAGCCTGT GCGACCCAAC GGATGCGACA
CGGCAATTGG GCACAGCTCC TAACGCCGAT AAACAGGACT GCAACCTCTG CCTAGTGCAA
ATCGAAAATA CCGATGCCAG CCTGCGCTGC GTTAAAGCCT GTGAAACGCC CGCCGAAGCG
GGCTTAAAAG TCATCACACA ATCGGCATAT TTAACTAAAC AGCGCCAAGC TGCATTGAGC
ACGATTTTAA GTGACCACTT TGCCGATTGT GAGGCCCCCT GCCAGCAGGC CTGCCCTGCG
GGCGTCGATG TACAAAGTTA CCTGTACCAC ATTGCCCAAG GCGACCACAC CCAAGCCATT
AAAGTCATTA AAGACACTCT GCCGCTGCCG CTGTCGATTG GCCGAGTCTG CCCCGCGTTT
TGCGAGAGCG AATGCCGCCG CGGCCTCGTC GATGACCCCA TTGCCATTCG TCAACTTAAG
CGCCACGCCG CCGATTTAGA CTTGGCCGAT GACGAGCAAG GCAATAGCTA TCAGCCGCCG
CGCCTCGCAG ACACAGGTAA GAAAATTGCC ATTATTGGCG CGGGCCCAGC AGGCTTAAGC
GCGGGTTATT ACCTGTCAAA CCAAGGGCAT AATGTTGAGA TATTTGAAGC CATGCCCAAG
GCGGGCGGCT GGCTGCGCTA CGGGATCCCC GAATACCGTT TACCTAAGGC GATTCTCGAT
AAAGAAATCG AGCTGCTGTG CCGCAATGGG TTAACCATTC ATACGGATAC TCGCCTCGGC
CATGAAATTC ATTTAGCCCA ACTGGTCGCC GATTTCGATG TGGTGTGCCT CGCCATCGGC
GCCCAAAAAG CGGTACCGAT GAACTACAAA GGCTCTGCGC TTGCGGGCTG TTACCTTGGG
GTGGATTTTC TTAAGGATCA TTGCCTCGAT AAGCAATTGA AGTTGGGCAA AAAAGTCGCC
GTCATTGGCG GCGGCAACAC CGCCATCGAC TGCGCCCGCA CCGCGGTGCG TGAAGGCTGC
GATGTCACCT TAATCTACCG CCGTACCCGC GCCGAAATGC CCGCCGAAGC CTACGAAGTA
CACGAGGCAG AAGTCGAAGG CGTGAAATTC CACTTTTTAA CCAATCCCAT TGAAAATCAT
AGTGATGATA ACGGACGAGT ACAGTCAGTC ACCTTTAGCA AAATGACGCT CGGTGAAGCC
GATACCTCGG GCAGACGCGC GCCAGTAGAC ACAGGAGAAA CCTTTACCGA GGCCTTCGAT
ACTGTTATCG CCGCCGTCTC CCAAGCGCCG GATCTGAGTT TTATGCAGGA TCCTATGGGA
CAACTCAGCC AGGGTGAACT GGCGCTGAGC CGCTGGAACA CGCTAATTGG TTGTGAACAA
ACCATGTCAT CGGGTGTAGA AAAACTGTTT GTGATGGGCG ATGCCCGCCG CGGCCCAGCG
ACTGCCGTAG CCGCCATTGG CGATGGCCGT AAAGCGGCAA TCGCTATTGA TAAGATGCTA
AAAATTGGCC TTAGCTGCGA TTTACATGCC CATGCGTTTA ACTCGGTTAA AACCATTCCA
AGCGCCCTCA TTCCAAGCGC CCTTAAGCAA ACCGAAACAA GCTCAAAAGC AGGGTCAACG
CTTTATCCCC ATACGCCGCG TCAGCTCCGC CTGAAGATGC CCGAACTCAC AGCGCTGCAA
CGGCTGCTGA ATTACAGTGA AGTTGAGCTA GGTTTTCCCG CCGATGCCGC TATGCAAGAG
GCGGCACGTT GCCTCGAGTG CGCCTGTCAG GCCAATACCG ACTGTAAGCT GAGGGACTAC
GCCACGGATT ACGGTGTGGA GGCCAAAAGC TTAGCCACTG AAAATGCACG GCATTTCAGT
GTGGATAAGA GTGCGCCCTT TATTCAATTC GATGCCAACC GCTGTATTAG CTGCGGTAAA
TGCGTCGATG TGTGTCAGCA GCAGAGTGGC CACTGCGCGA TTCAATTTAG CCAAGATTCC
TACCAGGCGC TGCCGCAGGA AATGACTCAA CACATGGAGC GCCGCGCGCC GAGAGTCGGC
TTTAGTGCGA GCATGGCCGA TAGCCACTGT GTGCAATGTG GTAACTGTGT ACAGGTTTGT
CCGACGGGGG CACTGGTCGA TGCCCGGGAT AAACGTCAGG GGGATTGTAC AGAGTTAAAA
ACTGCCTCAA CGATTTGTAC TTACTGCGGC GTGGGCTGCC GTCTCGACCT TAAAATCGAC
CCCAACGCCA ATCGCATTCG CCATATCGAA GGCAATAAGG ACTCGGTCGT TAACCAAGGC
ATGCTGTGCG TTAAGGGACG TTTTGGCTTC GATTTTATTC ACAGCGACAA ACGCCTCACT
ACGCCACTGA TCCGTAAAAA CGGCGAGCTA CAACCGAGTA GCTGGCCCGA AGCCATCGCC
TATGTGGCAA AACGCTTAAC CGAGATAAAA CAAAAAGATG GCAGCAATGC CCTCGCCAGC
CTCGCCTCGG CCAAGGCCAC CAACGAAGAT AACTTTGTGC TGCAAAAGTT TGTTCGTAGC
GTTCTTGGCA CCAACAATAT CGATCACTGC GCTCGCCTCT GCCATTCATC GACGGTAACA
GGCTTGCAGC AGAGTATTGG TAGCGGCGCC ATGACCAATG ATATTCCGAG CATCAAAGAC
TCAGACGTCA TCTTTATTTT AGGGTCGGAT ACCACCTGCG CTCATCCGAT TATCGCCTCG
AAAATTCAGC AGGCGGTGAT GCAGCACGGG GCGCGTTTAC TGGTTGCCGA TCCAAAGCGG
GTTGGCATTG CCGAAAAGGC CGAGCTGTAT GTCGCCCATA GACCGGGCAC GGATGTGATG
CTACTCAACG CCATTATGGC GGAAATTATT CGCCACGATT GGCAGGATAA AGCCTATATT
GCCGAGCGCA CCGAAGGCAT TGAGGCCCTC TATGCAGAGT TAGCCAAGGA CGATTATTCC
CTCGAAAACG CAGCGCTTAT CACGGGCGTA AAAGCCGAAG ATATTGCCCG CCTCGCGCGG
ACCATAGGCA CAGCCGAAAA GACCGCGGTT TACTACGCCA TGGGCATCAC TCAGCATACG
ACGGGGCACG ATAACGTCAC CGCCATTTCT AATTTGCAGT TACTTTGCGG CAATATTGGT
GTGTCAGGCG CGGGCATTAA CCCACTTCGC GGCCAGAGTA ACGTCCAAGG TGCCTGCGAC
ATGGGCGCCC TACCCAACTA TTTTACTGGT TACCAAAAGG TCACGGATCT TCATGCCAGA
ATGCGCTTCG AAAACCATTG GCAAACACGG TTATCGGGGG AGATTGGCGT CACCGCCACC
CATATGATGC ACGATATTGC CAAGGGCAAA ATTAAAGCCT TGTATGTGAT GGGTGAGAAT
CCCGTGCTCA GCGACCCCGA CCAAGCCCAT GTGCTTAATG CATTGAGCCA AATCGAGTTT
CTGGTGGTGC AGGATATCTT TTTAACCGAG ACGGCCGAGC TTGCCCATGT GGTCTTACCC
GCCGCCGCAT TTGTGGAAAA ACGCGGTCAC TTTACCAATA CCGAGCGTCG TGTACAGCGA
CTCGAGCAGG CACTCGCCTC ACCGGGTGAA GCCTTGCCCG ATTGGCAGAT AGTGCAAGCA
GTCGCTAACG CCATGGGCGC TAACTGGGAC TATACCAACG AAGAAGCCAT CTGGCGCGAA
ATCAACGAAC TTACTCCGCA GTATCGCGGC ATTCGCTGGG ACAGATTAAG TGCCAATGCC
GAAGGTCAAA TCTCCCAAGG GATTCAATGG CCCTGTCCAG ATGAAACCCA TCCCGGAACA
CCGATTATGC ATCAGAGCCA ATTCACTCGA GGCTTAGGCT TATTTACGCC TGTCAGTTAT
CGCCTACCTG CTGAAATGCC CTGCAACGAG TATCCACTGA CGCTCTCAAC AGGGCGGCTG
TTGGAGCAAT TCCACACTGG CACACTCACC CGTAAGACTC CTGGGCTGGA TTTACTCGGC
GCGCCTAAGG TGATGATTTC GGTTTATGAT GCGGAGCAAC TAGGGATAAA CAATGGCGAT
AAACTTCGCC TCACCACCCG CCGCGGAGAG ATTGAAATCG ATGCCTTTGT GACTAAACGC
GCCCAGGCGG GCGTGCTGTT CCTGCCGTTC CATTTTGTGG AAGCGGCGGC GAATAAGCTC
ACTATCAATG CCTTAGATCC TGTGGCTTAT ATTCCCGAAT ATAAGGTCTG TGCGGTCAGG
GCGGAAAAGG TGACAGCAAG GGTGAGTGAA CCAGCTTAA
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| Protein sequence | MIELKIDNHS VTAEPNDNLL QAARKAGIAI PSLCDPTDAT RQLGTAPNAD KQDCNLCLVQ
IENTDASLRC VKACETPAEA GLKVITQSAY LTKQRQAALS TILSDHFADC EAPCQQACPA
GVDVQSYLYH IAQGDHTQAI KVIKDTLPLP LSIGRVCPAF CESECRRGLV DDPIAIRQLK
RHAADLDLAD DEQGNSYQPP RLADTGKKIA IIGAGPAGLS AGYYLSNQGH NVEIFEAMPK
AGGWLRYGIP EYRLPKAILD KEIELLCRNG LTIHTDTRLG HEIHLAQLVA DFDVVCLAIG
AQKAVPMNYK GSALAGCYLG VDFLKDHCLD KQLKLGKKVA VIGGGNTAID CARTAVREGC
DVTLIYRRTR AEMPAEAYEV HEAEVEGVKF HFLTNPIENH SDDNGRVQSV TFSKMTLGEA
DTSGRRAPVD TGETFTEAFD TVIAAVSQAP DLSFMQDPMG QLSQGELALS RWNTLIGCEQ
TMSSGVEKLF VMGDARRGPA TAVAAIGDGR KAAIAIDKML KIGLSCDLHA HAFNSVKTIP
SALIPSALKQ TETSSKAGST LYPHTPRQLR LKMPELTALQ RLLNYSEVEL GFPADAAMQE
AARCLECACQ ANTDCKLRDY ATDYGVEAKS LATENARHFS VDKSAPFIQF DANRCISCGK
CVDVCQQQSG HCAIQFSQDS YQALPQEMTQ HMERRAPRVG FSASMADSHC VQCGNCVQVC
PTGALVDARD KRQGDCTELK TASTICTYCG VGCRLDLKID PNANRIRHIE GNKDSVVNQG
MLCVKGRFGF DFIHSDKRLT TPLIRKNGEL QPSSWPEAIA YVAKRLTEIK QKDGSNALAS
LASAKATNED NFVLQKFVRS VLGTNNIDHC ARLCHSSTVT GLQQSIGSGA MTNDIPSIKD
SDVIFILGSD TTCAHPIIAS KIQQAVMQHG ARLLVADPKR VGIAEKAELY VAHRPGTDVM
LLNAIMAEII RHDWQDKAYI AERTEGIEAL YAELAKDDYS LENAALITGV KAEDIARLAR
TIGTAEKTAV YYAMGITQHT TGHDNVTAIS NLQLLCGNIG VSGAGINPLR GQSNVQGACD
MGALPNYFTG YQKVTDLHAR MRFENHWQTR LSGEIGVTAT HMMHDIAKGK IKALYVMGEN
PVLSDPDQAH VLNALSQIEF LVVQDIFLTE TAELAHVVLP AAAFVEKRGH FTNTERRVQR
LEQALASPGE ALPDWQIVQA VANAMGANWD YTNEEAIWRE INELTPQYRG IRWDRLSANA
EGQISQGIQW PCPDETHPGT PIMHQSQFTR GLGLFTPVSY RLPAEMPCNE YPLTLSTGRL
LEQFHTGTLT RKTPGLDLLG APKVMISVYD AEQLGINNGD KLRLTTRRGE IEIDAFVTKR
AQAGVLFLPF HFVEAAANKL TINALDPVAY IPEYKVCAVR AEKVTARVSE PA
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