Gene Shewana3_3288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3288 
Symbol 
ID4477397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3933711 
End bp3935444 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content46% 
IMG OID639727898 
ProductMORN repeat-containing protein 
Protein accessionYP_870918 
Protein GI117921726 
COG category[S] Function unknown 
COG ID[COG2849] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCCAT TTACTGTAAA ACTGCTCCTA GGAGCACTCG CCCTCATCAG TACCCATGCC 
AATGCAGAGA AGGTATTACT CGATGCCCAT TGGAATGTCA TCAAAGATGA GAAAAAAGCG
CTGTACTATT TTGAGCAACC CGTTGATCTG ACTGATGGCT ACTATAAGGT CGAGGTTTAC
TACAAAGAAA AGAATAGGCT TTTCTGCTCA ACGGCCATCG CCGATAAAAA TATCGGTAAG
GCACTCACTA GCGAGCAATT TCGCGGGCCT TATCAATGTT ACTTCGACGA TGGAACCCCC
TACGAACAGG GCTTTCGCAA CGGGCAAGGT CAGCTCGATG GCGTCATCAA AAAGTACATT
GCCACAGGCC AATTATATAC TGAGTCGCAC TATGAAAATG GTGTAAAACA AGGCCCAGAA
ACCGGTTATT GGAATGGCGG CAATATCCGC AACAAAACCA CCTATAAAGA TGGCCAAGCC
GTCGGTATCA GCGAAAATTT TAGTCCCGAA GGTGAAGTCA CCGCCAAAAT CTGCCATGAC
CCCACCTGCG TCAGCCAATA TTTTAATCTA GGCAAACTCA ACCGAGAGGA GCATAAGGTT
GATGGTCTTC TGCAAGGCAC AGAGACCACT TGGGGGCTGA ATGGCCAAGT CATCTCCACC
CAAGAGTGGT TGAAGGATAA AAAACACGGC GACTACTTTA GCTATTTTGA CAATGGCAAA
GTAGAGCAGC ACTTTCAGTA TCAACAGAAT TATAAGGTCG GTGAGCAGCT CACTTATTTT
GAAAATGGCC AGCTCAAATT AAAGGAAGTC ACCAACGATA AGGGCGATGT CATCCAGGCC
ATCGAATACG ATGACAAGGG TGAGATTAAA CGCACTACCG ACAGCAAATA CCAAGGTAAT
CGCTGGGTTT ATCGCAAACA GCAGCGCTAT CGCGATGGCC AATTGATTGA GACTCAAGAA
GAAGACAAAC TCAAAAACGG GTCGCTCTCT GAAACCTTCA AACAAGGCTT GTTAATCGAA
CGCCAGGAGC GACTCAATAA GCAATTGAAT GGCTTACAGA TCAAATCCTT CGATTACAAC
GATGTCATTA CCCTCACCCG CGAATATTAT CAGGCGGGTA AGCGTGAAGG CGCCTATGAG
ACGGTAAAAA TTGAGCCAGC CACAGGCAAA AGTCAGCTGG TAGAGCAAGG TCAGTATGCC
AAGGATAAAC AAGCAGGCAC TTGGAAGAAA TTTCAAGATG ACGCCACCCT CACCTATAGC
CACGATGATA ATGGTGAGCT CCACGGTGAA TACCTCAACA AGGCCAACTC AGGCCAGTTG
CTTGAATCTA TGCACTTTAA ACATGGCAAG CCCGATGGTT TAGTCCAGCG TTACGCCAGT
AATGGCCAAG TGTATGAAAA AGGCGAATAT CGTAATGACC TGCGCCAAGG CGATTGGGTA
TTCACCGATA ATGAATTCCA ATATCGCCCA AGGCCGAATC CTGAAAGACG CTCTTGGCAT
GGCCGTTTTG AGCAGGGTAA GCAAGTCGGC CACTGGGAAT TGCGTACCCC CGAGGATTAT
GTGCTCGAAA TAGCCAACTA TGACGACCAA GGTAACTTGC ATGGTAAGCA ATACCAGTTT
GAGAATAATG GCTCGATACA GGTGATTAAT CATTACAATC ACGGCCAATT TTTAAATCAG
GAAACACCGC CGCCCGTCTT ACCCGTTGAA GATAGCGTGT TTCCTTTTTA TTAA
 
Protein sequence
MRPFTVKLLL GALALISTHA NAEKVLLDAH WNVIKDEKKA LYYFEQPVDL TDGYYKVEVY 
YKEKNRLFCS TAIADKNIGK ALTSEQFRGP YQCYFDDGTP YEQGFRNGQG QLDGVIKKYI
ATGQLYTESH YENGVKQGPE TGYWNGGNIR NKTTYKDGQA VGISENFSPE GEVTAKICHD
PTCVSQYFNL GKLNREEHKV DGLLQGTETT WGLNGQVIST QEWLKDKKHG DYFSYFDNGK
VEQHFQYQQN YKVGEQLTYF ENGQLKLKEV TNDKGDVIQA IEYDDKGEIK RTTDSKYQGN
RWVYRKQQRY RDGQLIETQE EDKLKNGSLS ETFKQGLLIE RQERLNKQLN GLQIKSFDYN
DVITLTREYY QAGKREGAYE TVKIEPATGK SQLVEQGQYA KDKQAGTWKK FQDDATLTYS
HDDNGELHGE YLNKANSGQL LESMHFKHGK PDGLVQRYAS NGQVYEKGEY RNDLRQGDWV
FTDNEFQYRP RPNPERRSWH GRFEQGKQVG HWELRTPEDY VLEIANYDDQ GNLHGKQYQF
ENNGSIQVIN HYNHGQFLNQ ETPPPVLPVE DSVFPFY