Gene Shewana3_3286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3286 
Symbol 
ID4477395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3930179 
End bp3931141 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content55% 
IMG OID639727896 
Productdienelactone hydrolase 
Protein accessionYP_870916 
Protein GI117921724 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCAC AACCCAAGTC CGACAATAAC GCGCCAGCTG CCCAGCCTAT CCCGCAGGAG 
GCCTTCGATT GGTACGATGA ATATGCCCAC GGCATCATCG ACCGCCGCGA ATTTATGGCT
CGCCTCGCAG GCCTTGTGGC ACTGGGGTTT ACCATGACAA CGCTTACTGG CGCACTCATG
CCCAACTATG CCTTAGCCGA GCAAGTCTCC TTTAACGATC CCAGCATTCA AGCCAGTTAT
GTGAAGTTTC CCTCCCCCGA GGGCTATGGT GAAGGGCGCG GTTATTTAGT GATGCCAGCT
TCTATGCTGA TTCCCGGCAA AGAGGCTGGC GATTCTAAGA CCCTGGACCC CACTAAAAAA
GCCCCTGTGG TGTTAGTGGT GCATGAAAAC CGTGGCCTGA ATCCTTATAT CGAAGATGTT
GCCCGCCGCT TAGCGGCCAA GGGCTATATC GCCTTTGCCC CCGATGCGCT TTACAGCCTC
GGCGGCTATC CCGGCAATGA CGATGCGGGC CGCGCCATGC AAGCCAGCCT CGACAGAGCC
AAAATCGAGC AGGACTTTAT CGCCGCAGCC CGCTTTTTAA AGGCCCACCC CCAGAGTAAT
GGCAAACTCG GCGCCGTCGG TTTCTGCTTT GGCGGCTATA TAGTCAATAT GCTCGCCGCC
AGCATTCCCG ATGAGCTAGC TGCTGGCGTG CCTTTTTATG GCACGCCTGC AGCCACAGAG
CTACGCAGCC GAGTTGAAGG CCCGCTGATG TTGCAATTTG CCGCTTTAGA TCAACGGATT
AACGACACTT GGGGCGAGTA CGAAACCCAA TTGAAGGCTA ACAAGGCCGA GTATATTGCC
TACCTCTATC CCAATGTGAA TCATGGTTTT CATAATGATT CCACCGCCCG CTACGATGAG
CCAACCGCCG AGCTCGCATG GGCAAGAACC TTGGATTTTT TTGGGAAGTA CCTACAAGGT
TAG
 
Protein sequence
MSPQPKSDNN APAAQPIPQE AFDWYDEYAH GIIDRREFMA RLAGLVALGF TMTTLTGALM 
PNYALAEQVS FNDPSIQASY VKFPSPEGYG EGRGYLVMPA SMLIPGKEAG DSKTLDPTKK
APVVLVVHEN RGLNPYIEDV ARRLAAKGYI AFAPDALYSL GGYPGNDDAG RAMQASLDRA
KIEQDFIAAA RFLKAHPQSN GKLGAVGFCF GGYIVNMLAA SIPDELAAGV PFYGTPAATE
LRSRVEGPLM LQFAALDQRI NDTWGEYETQ LKANKAEYIA YLYPNVNHGF HNDSTARYDE
PTAELAWART LDFFGKYLQG