| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3278 |
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| Symbol | cobT |
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| ID | 4477387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3917691 |
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| End bp | 3918743 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639727888 |
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| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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| Protein accession | YP_870908 |
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| Protein GI | 117921716 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCAAT CTGTCCCGTT ATTTCAAATC GAGCCTGTGA GTAAAGCGCA GGATCAACTC
ATCCAGCAAA AGATCGATCT TAAGACTAAG CCGCCCGGCG CTCTGGGGCA GTTAGAGTCC
TTGGCGTTGC AAATTGCCCG CATCCAAGGG GCTAAGCAGT TGCAGATTGT TTACCCGACT
ATGTTGGTGT TTGCCGGAGA TCATGGGATT GCTGCCGAAG GGGTGTCGAT TGCCCCGAGT
GAAGTCACGC GGCAGATGGT GCAAAACTTT GCCCATGGCG GCGCGGCCAT CAATGTGTTT
TGTCGTCAGT TAGGCTTCAA TCTCGAAGTG ATTGATTGTG GTATTTTAAC CCCAGTTGAA
GATGCCGAAG GCATTATCGA CCAACGCCTT GGTGCGGGAA CGGCCGCGAT TCACTTAGAA
CCTGCCATGA CGTTAGCCTG CGTGGATAAG GGCTTTGCCA TGGCGCAGGC ATTAATCGAG
CGTCACCATC AGGCGGGCTG TAACTTGGTT GCCTTTGGTG AGATGGGCAT AGGTAATACT
TCGTCAGCTG CGGCGATTAT GGCGGCCATT ATGCAACTCG ATGTGGCCGA CTGTGTTGGC
CGTGGTACGG GCATCAATAG CGAGACCCTA GAGCGTAAAC AGATGCTTAT CGAACTCGCG
CTGCTGTTAC ACCAGAGTGC GATGACAGGG CCTCGGCAAG TGCTGGCCTG TTTGGGCGGC
TTTGAAATTG TGCAGATGAC GGGGGCCATG CTCGCCGCTG CCGAGCGCAA GATGCTGGTC
GTGGTGGATG GTTTTATTGC GACCGCAGCG GCTTTGGTTG CCGTGAGTAT CAATGCGAAT
GTGCGGGATT ATTTGATTTT TGCCCACCGC TCCGAGGAGC AAGGTCATCA GCGCATGTTG
GAACATTTAA AGGCTAAGCC CTTGTTATCT TTAGGGCTGC GATTAGGCGA AGGCACGGGC
GCTGCCTTGG CATTGCCGTT AATTCAAGCC GCTGTAAATT TTTACAATCA AATGGCGAGT
TTTAGTGATG CGGGGATTGA GGCTGTTGTA TGA
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| Protein sequence | MPQSVPLFQI EPVSKAQDQL IQQKIDLKTK PPGALGQLES LALQIARIQG AKQLQIVYPT
MLVFAGDHGI AAEGVSIAPS EVTRQMVQNF AHGGAAINVF CRQLGFNLEV IDCGILTPVE
DAEGIIDQRL GAGTAAIHLE PAMTLACVDK GFAMAQALIE RHHQAGCNLV AFGEMGIGNT
SSAAAIMAAI MQLDVADCVG RGTGINSETL ERKQMLIELA LLLHQSAMTG PRQVLACLGG
FEIVQMTGAM LAAAERKMLV VVDGFIATAA ALVAVSINAN VRDYLIFAHR SEEQGHQRML
EHLKAKPLLS LGLRLGEGTG AALALPLIQA AVNFYNQMAS FSDAGIEAVV
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