Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3272 |
Symbol | |
ID | 4477381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3911804 |
End bp | 3912628 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639727882 |
Product | periplasmic binding protein |
Protein accession | YP_870902 |
Protein GI | 117921710 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAATGC GACGCTTTAT TGCCCTCGGC CTGAGCTTTG CGCTGTTACC CGCAGTGGCG ATGGCCGAGC CTGCAAAACG TATTATTGCG CTTTCGCCCC ATGCGGTTGA AATGCTCTAC GCCATCGGCG CAGGGGAGTC GATTGTGGCC GCGACAGATT ATGCGGATTA TCCCGAAGCG GCAAAAAAAA TCCCCAGTAT CGGTGGATAT TATGGGATCC AGATTGAGCG GGTATTAGAG CTTAATCCCG ATCTGATTGT GGTGTGGGAC ACGGGCAATA AAGCCGAGGA TATCAATCAA CTCAAAAACT TAGGTTTTAA ACTCTATAGC AGCTCCCCAA AGACGCTTGA GGATGTCGCC AAAGAAATTG AGGAGTTAGG TGAGCTGACA GGGCACACAG AGCAGGCGAG TCGAGTGGCG GCGGATTATC GCAGTGAGCT GCTGCGATTA CGTAGCGAGA ATGCGGCTAA ATCCGAGCCA AAGGTGTTTT ATCAGCTATG GTCTACGCCG TTAATGACGG TCGCGAAAAA CAGTTGGATC CAGCAGATTA TCGGTGTTTG CCATGGCAAA AACGTTTTCT ACGATGCGGC GAGTGATTAC CCACAGGTGA GTTTAGAGAA CGTATTACTG ACCTTGCCCG AGGTGATTTT ACAGAGCGAA GAGGAGGGTA ATGTCAAAGG GGTTGATTGG AGCCAATGGG CCGAAATCCC CGCGGTTAAA AACCAGCATA TTTATCAATT AAATGCCGAC TTATTGCACC GCGCGACGCC CAGAGCGTTA CTCGGAGTAA AAGCCGTATG TGATGCCTTG GATAAAGCAC GTTAA
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Protein sequence | MLMRRFIALG LSFALLPAVA MAEPAKRIIA LSPHAVEMLY AIGAGESIVA ATDYADYPEA AKKIPSIGGY YGIQIERVLE LNPDLIVVWD TGNKAEDINQ LKNLGFKLYS SSPKTLEDVA KEIEELGELT GHTEQASRVA ADYRSELLRL RSENAAKSEP KVFYQLWSTP LMTVAKNSWI QQIIGVCHGK NVFYDAASDY PQVSLENVLL TLPEVILQSE EEGNVKGVDW SQWAEIPAVK NQHIYQLNAD LLHRATPRAL LGVKAVCDAL DKAR
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