Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3260 |
Symbol | |
ID | 4477369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3902456 |
End bp | 3903196 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639727870 |
Product | ABC transporter related |
Protein accession | YP_870890 |
Protein GI | 117921698 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTATCAA TGAAGAATAT CAGCAAGGTT TTTAAAACGG ACTTAGTGGA AACCCATGCG TTGCGGGATT TCAACCTTGA GGTGAACGAG GGCGAGTTTG TGGCGGTTAC GGGGCCTTCG GGCTCAGGTA AAACCACCTT CTTAAATATC GCAGGCTTGC TCGAAGGCTT CACCCATGGG GATTATTTTT TAGATGGGAT TAATGTCTCG AACCTCAGTG ATAACAAGAG TGCCGCCGTA CGCAACGAGA AGATTGGCTT TATCTTCCAA GGCTTTAACT TGATCCCCGA TCTTAATCTC GCGGAAAACA TTGAAGTGCC GCTGCGCTAC CGTGGTTTTA GTGCCAAGGA GCGTAAACGC CGTGTGGAGC AAGCGTTAGA GCAAGTGGGC TTAGGCGCGC GGATGAAGCA TTTGCCGACC CAATTATCCG GCGGTCAACA GCAAAGGGTG GCGATTGCTC GCGCTTTAGC GGGGGAGCCT CGTTTTCTGC TCGCCGACGA ACCTACGGGT AACCTCGACA GTTTAATGGC CCGCCAAGTG ATGGAATTAT TAGAGAATAT TAATCAGTCT GGCACCACCA TCATCATGGT GACTCACGAT CCTGAACTGG CTCGCCGTGC CCAGCGCAAT ATCCAAATTG TCGATGGTCA AGTCTGCGAC TTTACCATGT ATCAACCTAA TGCGGCCCGC AGTGCAAGCC ACGGTAGTGT CGATAAACTG GTTGCTAACG CCCAAGGCTA G
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Protein sequence | MLSMKNISKV FKTDLVETHA LRDFNLEVNE GEFVAVTGPS GSGKTTFLNI AGLLEGFTHG DYFLDGINVS NLSDNKSAAV RNEKIGFIFQ GFNLIPDLNL AENIEVPLRY RGFSAKERKR RVEQALEQVG LGARMKHLPT QLSGGQQQRV AIARALAGEP RFLLADEPTG NLDSLMARQV MELLENINQS GTTIIMVTHD PELARRAQRN IQIVDGQVCD FTMYQPNAAR SASHGSVDKL VANAQG
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