Gene Shewana3_3260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3260 
Symbol 
ID4477369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3902456 
End bp3903196 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content51% 
IMG OID639727870 
ProductABC transporter related 
Protein accessionYP_870890 
Protein GI117921698 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATCAA TGAAGAATAT CAGCAAGGTT TTTAAAACGG ACTTAGTGGA AACCCATGCG 
TTGCGGGATT TCAACCTTGA GGTGAACGAG GGCGAGTTTG TGGCGGTTAC GGGGCCTTCG
GGCTCAGGTA AAACCACCTT CTTAAATATC GCAGGCTTGC TCGAAGGCTT CACCCATGGG
GATTATTTTT TAGATGGGAT TAATGTCTCG AACCTCAGTG ATAACAAGAG TGCCGCCGTA
CGCAACGAGA AGATTGGCTT TATCTTCCAA GGCTTTAACT TGATCCCCGA TCTTAATCTC
GCGGAAAACA TTGAAGTGCC GCTGCGCTAC CGTGGTTTTA GTGCCAAGGA GCGTAAACGC
CGTGTGGAGC AAGCGTTAGA GCAAGTGGGC TTAGGCGCGC GGATGAAGCA TTTGCCGACC
CAATTATCCG GCGGTCAACA GCAAAGGGTG GCGATTGCTC GCGCTTTAGC GGGGGAGCCT
CGTTTTCTGC TCGCCGACGA ACCTACGGGT AACCTCGACA GTTTAATGGC CCGCCAAGTG
ATGGAATTAT TAGAGAATAT TAATCAGTCT GGCACCACCA TCATCATGGT GACTCACGAT
CCTGAACTGG CTCGCCGTGC CCAGCGCAAT ATCCAAATTG TCGATGGTCA AGTCTGCGAC
TTTACCATGT ATCAACCTAA TGCGGCCCGC AGTGCAAGCC ACGGTAGTGT CGATAAACTG
GTTGCTAACG CCCAAGGCTA G
 
Protein sequence
MLSMKNISKV FKTDLVETHA LRDFNLEVNE GEFVAVTGPS GSGKTTFLNI AGLLEGFTHG 
DYFLDGINVS NLSDNKSAAV RNEKIGFIFQ GFNLIPDLNL AENIEVPLRY RGFSAKERKR
RVEQALEQVG LGARMKHLPT QLSGGQQQRV AIARALAGEP RFLLADEPTG NLDSLMARQV
MELLENINQS GTTIIMVTHD PELARRAQRN IQIVDGQVCD FTMYQPNAAR SASHGSVDKL
VANAQG