Gene Shewana3_3249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3249 
Symbol 
ID4477358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3891694 
End bp3892125 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content50% 
IMG OID639727859 
ProductUspA domain-containing protein 
Protein accessionYP_870879 
Protein GI117921687 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCAG GTCAAATACT CTGGCCCACA GATTTTTCGG AAACTGCGGC CCATGCGCTA 
CGTTATGCTA TTGAAATGGC AAATTTATAC CATGTAGGGC TAAAGATATT ACACGTTGTA
GAGCAACCAA TCGGTGACGA GAACTATATG ATCTTAGCGA TCACGCCTGA GGAACTCGCT
AAGAGTATGG AAGAAGCCGC CGCAACCAAG ATGCAGGCTT TACTCGAGGG GCTCAAAACC
GAATTACCTA TTACCACCCT AATTCGCCGT GGCGATCCCG TCGATCAGAT TTTAGAAGAG
GCCAATGGTA AGGATGTGGG CATGGTGGTG ATTGCCAGCC ATGGCAGGAC GGGGATCTCG
CACTTTTTAC ACACTAATGT CGCCGAGGCC GTGGCCAACG GCGCCGCTTG CCCAGTTCTG
GTAGTGAAAT AG
 
Protein sequence
MRSGQILWPT DFSETAAHAL RYAIEMANLY HVGLKILHVV EQPIGDENYM ILAITPEELA 
KSMEEAAATK MQALLEGLKT ELPITTLIRR GDPVDQILEE ANGKDVGMVV IASHGRTGIS
HFLHTNVAEA VANGAACPVL VVK