Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3236 |
Symbol | |
ID | 4477345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3881646 |
End bp | 3882521 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639727846 |
Product | TonB family protein |
Protein accession | YP_870866 |
Protein GI | 117921674 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00481831 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACACCGA AACGATATCT GGTTTTTGGC GCATTAACCG TTGCAATCCA AACGGGTGTG ATTGCATCGC AGCCTGCTAT GCCATTACTA AGTAGTCTCA GTGAATCGAC ACAAATGACC GCATTCAAAG AAGCAAATAA AGCGGTTACC TTAAGCTTTG CAACCCATAG TGCAGCAGAA AAATCAGCGG CCATATCAGC GATAAAAAAT ACGCCTGCAA ATACGATTAC CGAAGATGCG ATTTCAACAA ATGTGCCTAA TACCAGTAAG CCCCAAACGG CGCCAACACT CACTGATACA CCAGTAACTG AAATAGCAAG GCAAGCACCC AAACCAACCA AAGCTAAGCC GCAAACGATT CAATCCGCAG TGCAAAACAA GCCAACGCCG AACACATCCT CTAAGGCAGG TGCGACAACT GCCAAACCTC TTATGGCCGC AAATACACAA CATCAGAAAG AAACTGGAGA GATAACAAAA CCTTCTGACC AACTGTTGTC GCAAATGGCA GAAAGCAACA CTCAAGATAA AACCGTTATT AACAATACCA ATGTGACGCC CACCAGTGTC AGCGAGAACA CTAAAGCCAC TCCCGAGGTT ATCGAGCTGG CAACACCGAC TTTTGCCAGT AAACCGCCGC AACCCACCTA CCCACGCATG GCACGTAAAA AAGGGCTTGA AGGCACGGCG ACGGTAGAAG TGATGTTTAA CGAATTTGGA CAACAGCTCG CCCTCACCTT AGTGAAAAGC TCGGGCGTGG GGCTGCTAGA TCAAGCGGCA TTAGAGGCGG TTGAAACCTG GGAGTTTCAA GCGCCCACCA ACAAACTGGC CAGCCATTAC AAGGTGAGAG TACCTATTCG CTTCGCCTTA AATTGA
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Protein sequence | MTPKRYLVFG ALTVAIQTGV IASQPAMPLL SSLSESTQMT AFKEANKAVT LSFATHSAAE KSAAISAIKN TPANTITEDA ISTNVPNTSK PQTAPTLTDT PVTEIARQAP KPTKAKPQTI QSAVQNKPTP NTSSKAGATT AKPLMAANTQ HQKETGEITK PSDQLLSQMA ESNTQDKTVI NNTNVTPTSV SENTKATPEV IELATPTFAS KPPQPTYPRM ARKKGLEGTA TVEVMFNEFG QQLALTLVKS SGVGLLDQAA LEAVETWEFQ APTNKLASHY KVRVPIRFAL N
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