| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3235 |
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| Symbol | |
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| ID | 4477344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3879310 |
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| End bp | 3881397 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639727845 |
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| Product | TonB-dependent heme/hemoglobin receptor family protein |
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| Protein accession | YP_870865 |
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| Protein GI | 117921673 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000386167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAA AGCCGTTAGT TATCGCCATT GCGATCGCAT TAACGACTAC GGCGCTAAGC
TTCACGTTAG CGGCTGAAGA AGGTGTGACT GCGCAGCAAA AGGAAAAGAA ACCGGAATTA
GTCGAGACTG AGTTTGATGA AGTATTAGTC AGCGCGACAC GCTTGAGTGA AAAAGTCTCC
CAGACGAGCC GCAGTGTTGC CGTTGTGAGT GAAGAACAGC TCAATGTGGC TCAGGCATCA
TCGGTTGCCG AAGCGCTAAA AAATGAAGCC AACATCACTT TAACCAATGG TCCGAGAGCG
ACGTCTCAAG GGGTTGAGAT CCGTGGTTTA AGCGGCGATC GTGTATTACA AACCATTGAT
GGTGCAAGAC AGAATACCAG TTCTGGTCAC CGTGGTTCTT ACTTTATGGA TCCAGAATTA
CTCAAATCAA TTGAGGTGAT TCGCGGTCCT GCCAGTAGTC TCTGGGGCAG TGGTGCTATC
GGTGGTGTGG TGGCGCAGAA TACTAAATCG GCTCAAGATT TCTTAGCCCC TAACGAAACC
TTCGGTGGCT ATCTAAAGCA AGGCTATGAC ACTAATGGCG ACCGCACTAA AACCAGCGCT
GCCGTGTATG GCCAACAAGA TACTATTGAT TGGTTAATCA ATGGATCTTA CTTTGACTCC
AATAATATCA ATACGGGGAA TGACGAAACC TTAACGAACA GTGCTTCTTT GGGGAGCAGT
GGTTTGGCTA AGTTTGGATG GCAAGCCGAT GAGGCTTCAC GCTTAGAGTT ATCGGCAAGA
GTTAACAAGA TTAATGAACT CGTGCCGAGT AATCCTTCCG CTGCGGTGAG CAGTTCAGTG
CCTTTAGTGC GCCGCAAAAC GGACGATCAA AACGTTACCC TTAATTACAG CTTGGCGCCG
GCAAATAATC CATATTTGGA CACTAAAGTG CAGGTCTATT GGAATAGCAC GGATTATGAC
GAAGACCGAG TGACAAAAGG TCAATTTGAT AGCACCGAAT ACCGCACCAT TGGCATCAAT
CTCAACAACA GTTCGCAGTT AGGGAACACT AAGCTGACCT ATGGTGTCGA TGGTTATCGC
GATACCCTTA AAACCGTTAG AGACGATAGG GGCCAAGTGG GGCAGCGCCC AGGGGATATC
GATGGTGAGA CCACAGTGTG GGGCGCCTTT ACCCGTGCCG ATATTCAATT GACGCAAACC
GTCAATCTTG ACGCCGCCTT ACGTTATGAC AGCTTCAAAA ACGAGAGTCA CAACCTTAAT
GCTTCTGCGG ATGACAATGA GTTATCGCCT TCGCTGGGCT TAAGTTGGCA GACTCAGCCG
TGGCTGACTT TAAGTGCACG GTATGATCAG GCTTTCCGTG CGCCAACGGT TGAGGAAATG
TTTTCTACCG GAACCCATTA TTGCATTCCG CCGATCCCCG GATTTTTACC CCAAGGTCTG
TGTAATACCT TTGCGACGAA TCCTAACTTA AAGTCTGAAG TCGCCCGCAA TAAAGAACTG
AAAGCCGATT TTCGTTTCAA CAACTTAGCC GGTGATGATG AGCTGGCTTT CACCGTAAAC
ATCTTCCGTA ACGACGTGGA CGATTTTATC GTTCAGCAAG TCTCCAATCC GTTAATGGGG
ATCCCAGGAT TTGAGCAAAC CACCTCATGG AATAACGTGG AAGATGCGCA ATTAACTGGC
TTTGAGCTCA GCGGCCGTTA TCGCATTGGG CAAACACGGC TGGCGATGAA TTACGGTCAG
ACCCGCGGTG AAGACCGTAA GACTGGCGAC TATATCGAAG GTATGCCCGC CAATAAGTTT
AACGTCGATC TCTCCCAAGG CATCATGGAA GGCGATATGA AACTCGGCAC TCGAGTGACC
TATGTCGCCA GCCAATCCAA TACGCCCGAA GGTTATCGCG TGGCTAAGTA TGACGACTAT
ACCCTGTGGG ATGTGTACCT CGCCTGGGAG CCAGCGATGG GGGCTATGTC TGGCCTGAGA
GTCGACTTTG CCATCGAAAA CATTGGTGAT GAGAAATACC AGCAGGCATG GCAGACCCTA
TATCAATCTG GTCGCAATAT GAAGTTGTCA GCACGTTATA TGTTCTAG
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| Protein sequence | MQKKPLVIAI AIALTTTALS FTLAAEEGVT AQQKEKKPEL VETEFDEVLV SATRLSEKVS
QTSRSVAVVS EEQLNVAQAS SVAEALKNEA NITLTNGPRA TSQGVEIRGL SGDRVLQTID
GARQNTSSGH RGSYFMDPEL LKSIEVIRGP ASSLWGSGAI GGVVAQNTKS AQDFLAPNET
FGGYLKQGYD TNGDRTKTSA AVYGQQDTID WLINGSYFDS NNINTGNDET LTNSASLGSS
GLAKFGWQAD EASRLELSAR VNKINELVPS NPSAAVSSSV PLVRRKTDDQ NVTLNYSLAP
ANNPYLDTKV QVYWNSTDYD EDRVTKGQFD STEYRTIGIN LNNSSQLGNT KLTYGVDGYR
DTLKTVRDDR GQVGQRPGDI DGETTVWGAF TRADIQLTQT VNLDAALRYD SFKNESHNLN
ASADDNELSP SLGLSWQTQP WLTLSARYDQ AFRAPTVEEM FSTGTHYCIP PIPGFLPQGL
CNTFATNPNL KSEVARNKEL KADFRFNNLA GDDELAFTVN IFRNDVDDFI VQQVSNPLMG
IPGFEQTTSW NNVEDAQLTG FELSGRYRIG QTRLAMNYGQ TRGEDRKTGD YIEGMPANKF
NVDLSQGIME GDMKLGTRVT YVASQSNTPE GYRVAKYDDY TLWDVYLAWE PAMGAMSGLR
VDFAIENIGD EKYQQAWQTL YQSGRNMKLS ARYMF
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