Gene Shewana3_3226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3226 
Symbol 
ID4477335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3868548 
End bp3869093 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content49% 
IMG OID639727836 
Productthiol:disulfide interchange protein, putative 
Protein accessionYP_870856 
Protein GI117921664 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4232] Thiol:disulfide interchange protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.291039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCACTA TCACTCTTAT CAGTCTGGTC ATTCTCGCAT TACTCGTGGG CGCGATTAGC 
CTGCTAATCT GGCAACGCAG CAAAGGTAAG CGCATTCCAC TCGCGGTAAT TTTTGTATTG
GGATTTTTCG CCGTAGGCCT AGGCGGAATT ATCGGTTTTG TACATAAAGG TGAAGATTAT
CAAGCCTATC AAAAGCTGCA GTGGCATACG CTTGCCCCTG AAAAAATCGC ACCGCTGGTC
GCCGATGGCT ACACAGTGTT TGTGGATATC ACCTCAGACT GGTGCAGCAT TTGCCAAACC
AACAAGGCTG AAGTCACCCA CAGAGAGCAA GTGGTGAATG CGCTGATGGC CGACAAGGTT
ATTTTGATGC AGGGAAATTG GAGCGAAGCC GATTCCACCA TTGCGGGTTA TATGAAGCAT
GAAGGCGTAC CTGGTACACC TTACAATAAG GTCTATGGTC CAAGGGCGCC TAACGGCATA
GTGCTGCCTT CAACGCTCAC CATAGAAGCT GTACTTAATG GCTTAGCTCA GGCAAAAGCA
CTGTAA
 
Protein sequence
MGTITLISLV ILALLVGAIS LLIWQRSKGK RIPLAVIFVL GFFAVGLGGI IGFVHKGEDY 
QAYQKLQWHT LAPEKIAPLV ADGYTVFVDI TSDWCSICQT NKAEVTHREQ VVNALMADKV
ILMQGNWSEA DSTIAGYMKH EGVPGTPYNK VYGPRAPNGI VLPSTLTIEA VLNGLAQAKA
L