| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3219 |
|---|
| Symbol | rplU |
|---|
| ID | 4477311 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 3862250 |
|---|
| End bp | 3862561 |
|---|
| Gene Length | 312 bp |
|---|
| Protein Length | 103 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639727829 |
|---|
| Product | 50S ribosomal protein L21 |
|---|
| Protein accession | YP_870849 |
|---|
| Protein GI | 117921657 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0261] Ribosomal protein L21 |
|---|
| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000450477 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGCTG TTTTTCAAAG TGGTGGTAAA CAACACCGTG TAGCCCCAGG CCACACAGTT
CGTTTAGAAA AATTAGAAGT TGCTACTGGT TCAACTGTTG AATTCGATCA AGTATTACTG
ATCGCTGACG GTGAAAAAGT GCACGTTGGT GCTCCTTTAG TAGCTGGCGG TAAAGTCGTT
GCTGAAGTAG TAAGTCATGG TCGTGGCGAG AAAGTAACTA TCGTTAAGTT CCGTCGTCGT
AAGCACCACG ACAAGAAGTT GGGCCACCGT CAGTGGTTCA CCGAAGTTAA AATTACTGCT
ATCAACGCAT AA
|
|---|
| Protein sequence | MYAVFQSGGK QHRVAPGHTV RLEKLEVATG STVEFDQVLL IADGEKVHVG APLVAGGKVV
AEVVSHGRGE KVTIVKFRRR KHHDKKLGHR QWFTEVKITA INA
|
|---|
| |