| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3218 |
|---|
| Symbol | rpmA |
|---|
| ID | 4477310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 3861981 |
|---|
| End bp | 3862235 |
|---|
| Gene Length | 255 bp |
|---|
| Protein Length | 84 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639727828 |
|---|
| Product | 50S ribosomal protein L27 |
|---|
| Protein accession | YP_870848 |
|---|
| Protein GI | 117921656 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0211] Ribosomal protein L27 |
|---|
| TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000270517 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACATA AAAAAGCTGG CGGTTCTACT CGTAACGGCC GTGATTCAGA AAGTAAACGT
CTTGGTGTTA AGCGCTTTGG CGGTGAATCA GTTCTAGCTG GTAACATTAT CGTTCGTCAA
CGTGGTACTA AATTCCACGC TGGTGTAAAC GTGGGTATTG GTCGTGACCA CACTCTGTTT
GCTCTGACTG ACGGTAAAGT AAAATTCGAA GTTAAAGGTC CTAATAACCG TAAGTTTATT
AGCATCGAAG CTTAA
|
|---|
| Protein sequence | MAHKKAGGST RNGRDSESKR LGVKRFGGES VLAGNIIVRQ RGTKFHAGVN VGIGRDHTLF
ALTDGKVKFE VKGPNNRKFI SIEA
|
|---|
| |