Gene Shewana3_3216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3216 
Symbol 
ID4477308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3859813 
End bp3860574 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content51% 
IMG OID639727826 
Producthypothetical protein 
Protein accessionYP_870846 
Protein GI117921654 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00414919 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACGCAG ATACTCAAAA TGATATTACT CGGCAGGTTG TGCGTGTCGC ACAACTGCTA 
CTGGCCTACG GTGCTGAATC TGATTTAGTT GAAGAAATCA GTCAGCGCCT AGGTCAGGCC
TTAGGATTGG CAAGTGTTGA GCTTTCCATC TCCTCTAATT CCCTCGTGTT AACCAGTTTA
GTGCATGGTC GCTGTATCAC GACGACGCGT CGGATCCGCG AGCATGGCAT CAATATGACC
ATAGTCTGCG AGTTACAGCG CATCTGTTTA TTGACGGAAA AAGGTCTCTA TGGCCCCAAC
GAAGTGCGTA AACGCTTAGC GCGAATCGAA CCTAAGACCT ACCCGCCGTA TCTCGTGATC
TTGATGATAG GCCTGTCCTG CGCAAGCTTC TGTCATCTAT TTAATGGCGA TGTCGCCGCA
TCAATCATCA CTTTTTTTGC CTCTGCAGTA GGGATGTCGG TGCGCCTTGC GATCGCCAAG
CGGCATTTTA ATTTGCTGGT TAATTTTGCG GTGACGGCAT TTGTCACTAG CTTATTGGCG
CAGACGGGTT ATGTGTTTAA CTTGAGTGAG ACCCCGCAGG CGGCCATGGC GGCCAGTGTG
TTGATGTTGG TGCCGGGGTT TCCGATGATC AATGCGATTT CTGATATGGT CAAAGGCCAT
ATGAACGTGG GGATTTCCCG CTGGGGCCAT GCCACCTTGC TTACTGTGTC GTCCGTTATT
GGCATTACGA TTGCGATGCA GCTAGGGGGG ATCTTCCTAT GA
 
Protein sequence
MYADTQNDIT RQVVRVAQLL LAYGAESDLV EEISQRLGQA LGLASVELSI SSNSLVLTSL 
VHGRCITTTR RIREHGINMT IVCELQRICL LTEKGLYGPN EVRKRLARIE PKTYPPYLVI
LMIGLSCASF CHLFNGDVAA SIITFFASAV GMSVRLAIAK RHFNLLVNFA VTAFVTSLLA
QTGYVFNLSE TPQAAMAASV LMLVPGFPMI NAISDMVKGH MNVGISRWGH ATLLTVSSVI
GITIAMQLGG IFL