Gene Shewana3_3206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3206 
Symbol 
ID4478269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3848821 
End bp3851118 
Gene Length2298 bp 
Protein Length765 aa 
Translation table11 
GC content49% 
IMG OID639727816 
Productorganic solvent tolerance protein 
Protein accessionYP_870836 
Protein GI117921644 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1452] Organic solvent tolerance protein OstA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000004691 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.810097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATCC GTTACTTTCT GGCCTTGAGC CTGTTACCGC AAGTTGTCCT GGCAGACGAA 
TCTCCCACAG CCTCAGCGTC ACAATGCGTC ATTGAACCGC CAGTACCTCG TATCGTATCT
CAACCCGGCC TGAGCGCCGC CGATCAAGAG AAAATTCGTA TCGTGTCGGA CCGCTCCAAC
GCCGAAATGG GCAAACAAGC CATTTTTACC GGTGATGTGG TCTTCAGTCA GGGCGACAGA
CACATTGCCG CCGATGAAGC GATTCTCGAC CAAGCGACAG AGCAGTTCGA TGCCAATGGC
AACCTGGTTT TCCAAGACAG TATTTTTACC GTTACCGCCG ATTCGCTGCA GGCACAAATG
CGCAGCAACC GTGCGACCCT AAAGGGTGCC CAGTATTGGC TACATGGTCA GCAGGTTCAC
GGCGATGCTG AAAAGCTGCA AATCACCATG AACAACAACC TGATCTTAAC CAACACTAAC
TTCACCACTT GTCCGCCAGA CAATGTTTCT TGGCTACTCG AAGCAGAAAA AATCAAGATT
AACAGCGAAG AAGAATGGGG CGAGATTTGG AATGCTAAGC TGAGAGTCGC CGATATTCCG
GTGTTCTACA TTCCTTATAT GACGGTGCCA GTTTCCGACA AACGTAAAAC CGGTTTCCTC
TACCCAAGCT TTAGCACCAG CACCACCAAT GGTTTTGAAG TTTCCGCGCC CTATTATTGG
AATATCGCGC CGGAATACGA CCTCACCTTT ACACCTAACT ATATGTCTAG CCGTGGTTTA
TTCACCAAGA CAGAGTTTCG TTATCTCGCG GGTGAGGCCC AGAGTGGTCG CTTGAATTTA
GAATATTTGG GTAATGATCA GATGATCAGC GGCAGCCCAA ATCGTTACCT CTATAACTGG
CAACACCAAG GCGCCATCGA TAAAAACTGG CGGGTACTCG CCAACTTTAC TGAAGTGTCT
GATAACAACT ATTTCAACGA CTTAAAGTCT GATGTTAACC GCGCCACCGA TAACCAATTA
TCGCGGATTG GTGAAGTCAG CTACTTCGAA CGAGATTGGG ATATCAGCAC TCGGGTGCAA
GATATTAAAG TGCTGGGTGA GGACGAAAAG CCTTATCAAG TGATGCCGCA GGTGAATTTT
AACTACCGCG CCGCCGACTT TTGGAACAAC TTGGACTTTG GCTTTAATTC AGAGTTGACC
AACTTCGCCC ATCAAGACAG CGACATGAAT ACCGCCACCC GTTTGCATAT GGCACCTAGC
CTGACGCTGC CAATTCACGG CCCTTCGGGT TCGTTGACCA GCCAAGTCAA ACTGATGCAA
ACCAACTATT GGCAGGAGAA AAACAACAGT GGATTCGATG GCTTAGACGA TACTGTGAGT
CGCACCATTC CGCAGGTGCG GATCAATGGT CAAATCAACT TCGAGCGTTT TACCGAACTG
TTCGATCAAA ACTACCGCCA GACGCTCGAA CCTCAGTTCC AGTATCTGTA CGTAGGTTAT
GAAGATCAGC GTGGCATCGG CATTTACGAT ACCGCCCAGT TACAGGACGA CTACTTCGGT
CTGTTCCGTG ACCGCCGCTT CTCAGGCCTT GACCGCATCG CCGATGCAAA CCAAGTCACG
CTCGGTGTAA CAACGCGTTT CTTCGACGAT CACAACCAAG AGGCGACTAA GTTCAGCCTA
GGTCAGATCC TCTATCTGCA GGACAGTAAA CTGGGTTACG AAGATAACCT CTTCGAGCAA
AATCAATCGA CCTCAGTCTT GGCCGCCGAG TTAGATACCC GCTTAAGCCA TGACTGGTAT
TTAGGCGCAG CGATTCAATA CGACACCAAC TCGAGCGATA ACAAGAAGAC CGAAGTCACC
TTAGACTTCC GTCCCGAAGC CAATAAACTA TTGCAGCTCA GTTATCGTTA TGTGCCGGAT
CTATTGAACT CCAACACCAA CGATCTGGTG AATATTTCCC AAGCGGGTGT GCGTGGTGCC
TGGCCGATTA ACGACAGCCT GTATTTTGTC GGTAACTGGT ACTACGACCT CAACGAGAGC
CGCAGCATAG AAACCTATAC TGGTTTCCAA TATGAATCAT GCTGTTACGC AATTCGTCTC
AGCTATCACT ACCGAATTAA GACCAATTAC GATGACAACA TTGGTTCGGC CGTTATCGAT
GAGCGCGAGC AATTTGAAAG CGGTGTTTAC CTGAATTTAG TCATCAAAGG ACTCGGTGGT
TCGGGCCCAT TAGGCGTATC CGATATGCTC AATGACGGTC TGTTTAACTA CAGAAAACCG
CTTTATCTGA GGAATTAG
 
Protein sequence
MQIRYFLALS LLPQVVLADE SPTASASQCV IEPPVPRIVS QPGLSAADQE KIRIVSDRSN 
AEMGKQAIFT GDVVFSQGDR HIAADEAILD QATEQFDANG NLVFQDSIFT VTADSLQAQM
RSNRATLKGA QYWLHGQQVH GDAEKLQITM NNNLILTNTN FTTCPPDNVS WLLEAEKIKI
NSEEEWGEIW NAKLRVADIP VFYIPYMTVP VSDKRKTGFL YPSFSTSTTN GFEVSAPYYW
NIAPEYDLTF TPNYMSSRGL FTKTEFRYLA GEAQSGRLNL EYLGNDQMIS GSPNRYLYNW
QHQGAIDKNW RVLANFTEVS DNNYFNDLKS DVNRATDNQL SRIGEVSYFE RDWDISTRVQ
DIKVLGEDEK PYQVMPQVNF NYRAADFWNN LDFGFNSELT NFAHQDSDMN TATRLHMAPS
LTLPIHGPSG SLTSQVKLMQ TNYWQEKNNS GFDGLDDTVS RTIPQVRING QINFERFTEL
FDQNYRQTLE PQFQYLYVGY EDQRGIGIYD TAQLQDDYFG LFRDRRFSGL DRIADANQVT
LGVTTRFFDD HNQEATKFSL GQILYLQDSK LGYEDNLFEQ NQSTSVLAAE LDTRLSHDWY
LGAAIQYDTN SSDNKKTEVT LDFRPEANKL LQLSYRYVPD LLNSNTNDLV NISQAGVRGA
WPINDSLYFV GNWYYDLNES RSIETYTGFQ YESCCYAIRL SYHYRIKTNY DDNIGSAVID
EREQFESGVY LNLVIKGLGG SGPLGVSDML NDGLFNYRKP LYLRN