Gene Shewana3_3203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3203 
SymboldjlA 
ID4478266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3846058 
End bp3846846 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content51% 
IMG OID639727813 
ProductDna-J like membrane chaperone protein 
Protein accessionYP_870833 
Protein GI117921641 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1076] DnaJ-domain-containing proteins 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.469976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.967283 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTTT GGGGTAAGTT TTTTGGATTT GTTATCGGGT TTATGTTTGG CCGTATTTTC 
GGTGCTCTGC TGGGCTTATG GCTTGGGCAT CTCTACGACA AGCGCGCCGG TGGTGGCGCC
AGTTTTAGTC AGATCTTAGG TCAAGCCAAG AATCGACAGG GGATATTCTT TAACACCACC
TTCGCCGTAA TGGGTCATGT GGCCAAGGCG TCGGGTCGAG TGACTGAGAC CGATATTCGT
ATCGCGACTA TGTTGATGGA CCAGATGCGC TTAACGGGTG AAGCCCGTAA AGAGGCGCAG
CAGGCGTTCC GTGAGGGTAA AGAGCCTGAC TTTGACCTGC GTAGCAGCCT GCAAGCCTTT
CGCGCTGTGA CCCAAGGCCG TCAAGAACTG GTGCAAATGT TTATCGAGAT CCAAATTCAA
ACCGCCCTAT CGGACGGTGA GCTCGATGCC GCAGAACATG CAATTCTGAT GACGGTGGCC
CAAGAGTTAG GTTATGGTCG TGGGCAACTC GATGAATTAC TTAAACGTTG GCAAGCGGAA
TACCGTTTCC ACCAAACCTC TAATGGGAAT AAAACCTCGA TTACCGACGC CTATCATTTG
CTCGGCATTA ATGCCGAGGC AACGGATCAG GAGGTCAAGC GGGCTTATCG TAAGTTGATG
AATGAACATC ATCCCGATAA ATTGGTTGCT AAGGGATTAC CACCCGAGAT GATGGAAATT
GCCAATCGTA AGGCGCAGGA TATCCAAGCT GCGTACGACA GAGTGAAATC GGAGCGCGGC
ATGCGCTAA
 
Protein sequence
MRLWGKFFGF VIGFMFGRIF GALLGLWLGH LYDKRAGGGA SFSQILGQAK NRQGIFFNTT 
FAVMGHVAKA SGRVTETDIR IATMLMDQMR LTGEARKEAQ QAFREGKEPD FDLRSSLQAF
RAVTQGRQEL VQMFIEIQIQ TALSDGELDA AEHAILMTVA QELGYGRGQL DELLKRWQAE
YRFHQTSNGN KTSITDAYHL LGINAEATDQ EVKRAYRKLM NEHHPDKLVA KGLPPEMMEI
ANRKAQDIQA AYDRVKSERG MR