Gene Shewana3_3200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3200 
Symbol 
ID4478263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3842938 
End bp3843972 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content44% 
IMG OID639727810 
Producthypothetical protein 
Protein accessionYP_870830 
Protein GI117921638 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.789239 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCGG CAAGAAGACA GCTAATTGAT GCTAATTCAA CGCCCTTCTA CCATGTGATA 
AATCGCTGTG TTAGAAGGGC TTTTTTGTGC GGCGAGGATA AGTTATCTGG ACGTAGTTAC
GAGCATCGAC GTGGCTGGAT AGTTGATAAA ATCAAAGCCT TGTCTGCGAT ATTTTGTATC
GATATTTGCG CCTACGCGGT GATGAGCAAT CACTATCATT TAGTGCTTAA AATAGATGTC
GATAAGGCCA AATCCTTAAC GCAAAAAGAC ATTATCAGCC GTTGGTGCCA AATCACTAAA
GGCCATGCAG TCGCGACTAA GTATATGAAT GGTGATGCAT TAATCGAAGG TGAACGCATG
TTGCTCGATG GCTTAATTAC CGAGTGGCAT GAACGATTAA GCAGTATTTC TTGGTTTATG
CGTTGTTTAA ACGAAGAAAT TGCCCGTAAG GCTAATCGTG AAGATGAGTG CAAAGGCGCC
TTTTGGGAAG GTCGTTTTAA ATCGCAAGCA CTGTTAGATG AGCAAGCCTT GCTCGCGTGC
ATGATGTATG TCGATTTAAA TCCAATCAGA GCAGGCATTG CCGATTCTTT GCAATCCTCT
GATTTTACAT CGATTCAGGA GCGAATTAAC TCGCTAGATT CACCCAAGCG CCCATTAGCT
ATCTCAAAGC TACAAACTGA CTTCTCAACT AATGAAGCTC ATATTCCCCA CAAGTCTCTG
GTCCAATTCG ATGGCGCAGC TCACCTGAAT CAGCAAGTGG GTATTCCGTT TCACTTTGCC
GATTATCTCG AACTGATTGA TTGGACAGGC CGCGCCATCC GCCTTGATAA GAAAGGCTAT
ATCGATAATC AACGACCTAA GCTACTCAAT GAATTAGGTG TTGCGCCCGA TGCGTGGCTC
ACATCAGCCA AAGAGTTTCG TCGTCAATAC AGTGGCATAA GTGGTCGATG GGATAGCATG
TGTGAATTTA AAAAGCAGCA TAACAGCGGC AAATGGTGTA AAGGTAAAGC CTCAAGCCAA
GCGTTACATC CTTAA
 
Protein sequence
MTSARRQLID ANSTPFYHVI NRCVRRAFLC GEDKLSGRSY EHRRGWIVDK IKALSAIFCI 
DICAYAVMSN HYHLVLKIDV DKAKSLTQKD IISRWCQITK GHAVATKYMN GDALIEGERM
LLDGLITEWH ERLSSISWFM RCLNEEIARK ANREDECKGA FWEGRFKSQA LLDEQALLAC
MMYVDLNPIR AGIADSLQSS DFTSIQERIN SLDSPKRPLA ISKLQTDFST NEAHIPHKSL
VQFDGAAHLN QQVGIPFHFA DYLELIDWTG RAIRLDKKGY IDNQRPKLLN ELGVAPDAWL
TSAKEFRRQY SGISGRWDSM CEFKKQHNSG KWCKGKASSQ ALHP