Gene Shewana3_3192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3192 
Symbol 
ID4478255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3829987 
End bp3831117 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content53% 
IMG OID639727802 
Productsulfate ABC transporter, ATPase subunit 
Protein accessionYP_870822 
Protein GI117921630 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1118] ABC-type sulfate/molybdate transport systems, ATPase component 
TIGRFAM ID[TIGR00968] sulfate ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.246669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATTC GTTTAACTAA TATTTCCAAA AAATTTGGCC AATTTCAGGC GCTCTCGCCG 
CTCAATCTGG ATATTCAAGA AGGCGAGATG ATAGGTCTTC TCGGCCCTTC TGGCTCGGGT
AAAACTACCC TATTGCGGAT TATTGCTGGC CTTGAGGGCG CGGATAGCGG CCAAATCCAT
TTCGGTAATC GCGATGTGAC CCAAGTGCAT GTGCGCGACC GTAGAGTCGG ATTTGTCTTC
CAAAACTACG CCCTGTTCCG CCATATGACG GTCGCCGACA ACGTCGCCTT TGGACTCGAA
GTCATTCCGA AAAAACAGCG CCCGTCTAAG GCTGAAATCC AAAAGCGCGT CAGCCATTTA
CTCGAAATGG TACAACTGGG CCATTTAGCC CAGCGTTACC CTGAGCAGCT CTCGGGCGGA
CAAAAACAGC GTATCGCCTT GGCCCGAGCC TTAGCGACTC AGCCCGAAGT GCTGTTACTG
GATGAGCCCT TTGGCGCCCT CGATGCCAAG GTGCGTAAAG AACTGCGCCG CTGGTTGCGC
AGTCTTCACG ATGAGCTGAA ATTCACTAGC GTGTTTGTGA CCCACGATCA GGACGAAGCC
TTAGAGCTTT CCGATAGGGT GGTGGTGATG AGCAACGGCA ATATCGAGCA GGTCAATACT
CCGATTGAGT TGTACGCCCA ACCCAATAGC CGCTTTGTGT TTGATTTTTT AGGTAACGTC
AATCGGTTTG AAGCGAGCTG GCAACAAAAT CGTTGGACTA ATGGTGACGC CTTCTTAGTA
CCACCGGAGC AAACGCCACT GCAACAAAAC GGCGCGCTCT ATGTTCGTAG CCATGAGCTA
GCACTGGCGG ATAAACCCAA CAGCCAAGCC CATATTCCCT TTACCATAGT GGCGATAACA
CCGGTGGGCG CAGAAGTGCG TGTCGAACTG GCGCCTATCG GCTGGCAGAG TGAAGAACTG
TGGGAAGCCA CCTTTACCCA CCATCATCTG CAAGAATTAG GACTGCAAAA AGGCAGTCTG
GTCTACGCCA CCCCAAGAAC GGCTTATTTC TTTGGTGAAC AAGGTGATGG CTCGCCCGTG
CGTCAAAGCT GGCCCTTCCT CCCGCCGGGC AGCTTGGCCT TCGATATTTA A
 
Protein sequence
MSIRLTNISK KFGQFQALSP LNLDIQEGEM IGLLGPSGSG KTTLLRIIAG LEGADSGQIH 
FGNRDVTQVH VRDRRVGFVF QNYALFRHMT VADNVAFGLE VIPKKQRPSK AEIQKRVSHL
LEMVQLGHLA QRYPEQLSGG QKQRIALARA LATQPEVLLL DEPFGALDAK VRKELRRWLR
SLHDELKFTS VFVTHDQDEA LELSDRVVVM SNGNIEQVNT PIELYAQPNS RFVFDFLGNV
NRFEASWQQN RWTNGDAFLV PPEQTPLQQN GALYVRSHEL ALADKPNSQA HIPFTIVAIT
PVGAEVRVEL APIGWQSEEL WEATFTHHHL QELGLQKGSL VYATPRTAYF FGEQGDGSPV
RQSWPFLPPG SLAFDI