| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3175 |
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| Symbol | |
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| ID | 4477775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3816350 |
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| End bp | 3817075 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639727785 |
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| Product | pseudouridine synthase, Rsu |
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| Protein accession | YP_870805 |
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| Protein GI | 117921613 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.974586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCAA AACGTGGTCG TCTCGACAGA TATCTTGCCG TTAAGCTGCA AATTCACCGT
AAAGCCGTGC GAGAACTCTT GCTGACGGAG CGAGTATATG TGGATGGTAT CCCCGCCAAA
GCGCTCGATC TGCTGGTGGA TGAATTTTCC CATATTGTAT TTGATGGGCA AGTCTTACAG
GCCAATAAGC CCGTTTATCT AATGCTGCAC AAGCCTGTTG GTGTAGTGAG TGCCACCAAA
GACACAGAGC ACCGCACAGT GATTGATTTA CTCGACTGTG ATGCTCGCCA TGAGCTGCAT
ATTGCTGGGC GGTTAGATTT AAATTCTTCG GGTTTATTGC TGCTGACCAA TGATAGCCGT
TGGTCCGAGG CGCTCATGTC GCCCGATCAA AAGGTGGATA AAGTGTATCG GGTGACTTTA
GCGAATCCTT TGAGTGAGGA GTATATCGCG GCATTCGCGC AGGGCATGTA TTTTGGCTTT
GAAGATATCA CCACACAGCC AGCAAAGCTG ACTATCCTCG ACACTCATAT TGCAGAAGTC
ACGTTAAGGG AAGGAAAGTA CCATCAAATC AAGCGGATGT TTGGTCGTTT CCGTAATCCA
GTGGTGGGAT TGCATCGCCA TTCTATCGGT GAGATTACCT TGGATGATGG CTTAAAGCCG
GGCGAGAGTC GTATGTTAAC GGCGCAGGAG GTGGCTTCTG TCTATCTTGC GGACAAGTTA
GCCTAG
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| Protein sequence | MQSKRGRLDR YLAVKLQIHR KAVRELLLTE RVYVDGIPAK ALDLLVDEFS HIVFDGQVLQ
ANKPVYLMLH KPVGVVSATK DTEHRTVIDL LDCDARHELH IAGRLDLNSS GLLLLTNDSR
WSEALMSPDQ KVDKVYRVTL ANPLSEEYIA AFAQGMYFGF EDITTQPAKL TILDTHIAEV
TLREGKYHQI KRMFGRFRNP VVGLHRHSIG EITLDDGLKP GESRMLTAQE VASVYLADKL
A
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