| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3172 |
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| Symbol | |
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| ID | 4477769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3811687 |
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| End bp | 3812535 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639727779 |
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| Product | putative lipoprotein |
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| Protein accession | YP_870802 |
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| Protein GI | 117921610 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000327515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTATCTG TTACAATCGA ATGCTTTCTA TTTTATCGTG AAATGGAAAA ATTCTTAACT
ACAACTTATA AAGAATTGAA TTCAAGTATG TATAAATTCT CCAAAGGCTT AACCTTAGTC
CTATTTTCGC TAGCGTTATC AGCCTGTAGC AGCAGTCCTG AAGATAACGA TATTGCCGCC
AAAACCTCAC CTGATGTGCT CTATTCTCAG GCAAGAACCT CCATGGAACT TGGCAATTAC
TCTAAAGCCG TCCGTTCATT GGAAGCGTTA GACTCACGCT TTCCCTTCGG ACCACATAAA
ACTCAGGTTC AGTTAGATCT GATTTATGCC TATTACAAAA TGGACGATGT TGCCTCTGGC
ATTGCCAACA TTGACAGATT CATCCGTTTA AACCCAACCC ATCCCAATAT CGACTATGTC
TACTATATGC GTGGACTCGT CAATATGCAG GCGGACAGCT ATCTGTTCCA CGATATGTTG
AATATCGATA GAACCGACCG CGATCCTAAA AATGCCCAAG ATGCCTTTAA GGATTTTGAT
CGTTTAATCA AAACCTATCC CAACAGCAAA TATGCTGCCG ATGCGCAAAA ACGCATGTTG
TCGCTGAAAA ACCGTTTAGC AAAATATTCC ATTCAAGTTG CTGAGTATTA TATCAAAATG
AACGCTTGGA GTGCTGCGGC CGTTCGTGCT CAATCTGTGT TGGAAACATA TCCCGGCACT
CCTTCAACAG AACGTGCACT GGAGATTATG GCAGAAGCTT ATGGCGAGTT AGGTCAGAAC
CAACTGAAGC AAAACGTGCT CATGGTAATG CAAGCTAACT TCCCAAACAA CGAAATCTTA
TCGAACTAA
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| Protein sequence | MLSVTIECFL FYREMEKFLT TTYKELNSSM YKFSKGLTLV LFSLALSACS SSPEDNDIAA
KTSPDVLYSQ ARTSMELGNY SKAVRSLEAL DSRFPFGPHK TQVQLDLIYA YYKMDDVASG
IANIDRFIRL NPTHPNIDYV YYMRGLVNMQ ADSYLFHDML NIDRTDRDPK NAQDAFKDFD
RLIKTYPNSK YAADAQKRML SLKNRLAKYS IQVAEYYIKM NAWSAAAVRA QSVLETYPGT
PSTERALEIM AEAYGELGQN QLKQNVLMVM QANFPNNEIL SN
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