| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3169 |
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| Symbol | |
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| ID | 4477766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3807197 |
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| End bp | 3809770 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639727776 |
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| Product | ATPase |
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| Protein accession | YP_870799 |
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| Protein GI | 117921607 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00027679 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTCG ATCGTATGAC CAATAAATTT CAGCTTGCCA TCTCAGATGC CCAGTCGCTC
GCGCTCGGGC GTGATCATCA GTTTATCGAA CCGTTACATT TGATGATGGC GTTGCTCAAC
CAGGATTCTG GTTCTATCCA TCCTTTATTA ACCCAAGCTG GCATTCGGGT GAGTGCGCTG
CGCTCGCTGT TGAGCCAAGA GCTTGAACGT CTACCGCAGG TCGAAGGCAC TGGCGGCGAT
GTACAATTAT CCCAAGGTTT AATTCGCTTA TTAAACTTGT GCGACAAGTT GGCGCAAAAG
CGCAAAGACA AATATATCTC CAGTGAGTTG TTTGTCTTAG CGGCACTCGA GGGCAGTGAT
GCCTTGGCGC AATGCTTAAA GAAATCCGGC GCCACCAAAG AGCTGCTCGA GCAAACCATT
GAGCAAGTGC GCGGCGGTCA GAATGTGGAT GATCCTAACG CGGAAGATCA ACGCCAAGCG
CTGAAAAAGT TTACCGTTGA TCTCACTGAG CGTGCCGAGC AAGGCAAACT CGACCCTGTG
ATTGGTCGCG ACGATGAAAT CCGCCGCACC ATTCAAGTGT TGCAACGCCG TAGTAAAAAC
AACCCAGTGC TGATTGGTGA GCCTGGCGTG GGTAAAACCG CGATTGTTGA AGGCCTCGCG
CAGCGAATTG TGAACGGTGA AGTGCCTGAA GGGATTAAAA ATAAACGCGT TTTATCCTTA
GATATGGGCG CACTGATTGC GGGCGCTAAA TATCGTGGCG AGTTTGAAGA GCGTTTAAAA
GCCGTGCTTA ACGAGCTGGC GCAGGAAGAA GGCCAAGTGA TCCTCTTTAT CGACGAGCTG
CACACTATGG TGGGCGCGGG TAAAGGCGAT GGCGCCATGG ATGCGGGCAA TATGCTAAAG
CCTGCGCTGG CCCGTGGCGA TCTTCACTGT GTGGGTGCGA CCACTCTCGA CGAATATCGT
CAATATATTG AAAAGGATGC CGCCCTTGAG CGCCGCTTCC AAAAAGTATT AGTGGATGAG
CCTAGCGTTG AAGATACCAT AGCGATTTTG CGTGGTCTCA AAGAGCGTTA CGAGTTACAT
CACCATGTGG AAATTACCGA TCCGGCGATT GTGGCGGCGG CCACCATGTC GCACCGTTAT
GTGTCGGACC GTAAATTACC CGATAAAGCC ATCGACTTGA TTGACGAGGC GGCATCGAGC
ATCCGTATGC AGATGGATTC TAAGCCTGAA TCCCTCGACA GATTGGAGCG CCGTGCTATC
CAGTTGAAAC TGGAAGAGCA GGCATTAGCC AAAGAAAACG ATGAGGCGAG CCGCCGTCGA
CTTGAACATT TACGTGTCGA GTTGCATGAG GTTGAGGCTA AGGCGTCGGA GCTTAATGAA
ATCTGGCGCA CCGAAAAAGC GGCGCTTGCA GGGACTCAGC ATATTAAAGC CGACCTTGAG
CAGGCGCGGA TGGATTTAGA GGTGGCGCGC CGCGCGGGCG ACTTGACCCG TATGTCCGAG
CTGCAATATG GCCGTATTCC CGAGCTTGAA AAGCAACTGG ACTTAGCTTC GCAAGCCGAA
ATGCAGGATA TGACGCTGCT ACGAAATAAA GTTACTGACT TAGAAATTGC CGAAGTGCTC
TCAAAGGCGA CGGGGATTCC GGTTTCTAAG ATGCTTGAAG GCGAGCGTGA AAAACTGCTG
CAAATGGAAG TGGCACTGCA TGAGCGGGTG ATTGGCCAAA ACGAAGCCGT GGATGCGGTG
GCCAATGCGA TTCGCCGTAG CCGCGCAGGG CTGGCCGATC CGAATCGTCC TATTGGTTCG
TTCCTGTTCT TAGGACCAAC CGGTGTGGGT AAAACTGAGT TATGTAAGTC GTTGGCTAAG
TTCCTCTTCG ATACGGAATC GGCCTTAGTG CGCATCGACA TGTCTGAATT TATGGAGAAA
CATGCGGTTT CCCGTTTAGT GGGGGCGCCT CCTGGCTATG TCGGTTATGA AGAGGGCGGT
TACTTAACTG AAGCGGTGCG TCGTAAGCCT TATTCGGTGA TATTGCTCGA TGAGGTGGAA
AAGGCTCACC CAGACGTGTT CAACATTTTG CTGCAGGTGC TGGATGATGG CCGCTTAACC
GATGGTCAAG GTCGTACCGT CGACTTTAGA AATACGGTGA TCATCATGAC CTCAAACTTA
GGCTCTGACA TTATCCAAGA AGGATTCGGT CACCTAAGTT ATAGCGAAAT GAAGAGCGCG
GTGATGAATG TGGTTACCCA TAGCTTTAGA CCCGAGTTTC TAAACCGGAT CGACGAGTCA
GTGGTATTCC ATCCCTTGGA TGCGGAAAAT ATCAAGCATA TTGCATCTAT CCAAATTGCT
TCATTGCGTA AGCGTTTGGC AGAGAAAGAC TATACGCTGG AGATCACCGA CGAGGCATTA
TCGTTAATCG CCGAAATTGG TTTCGACCCA GTCTATGGCG CAAGACCGCT GAAACGTGCC
TTACAGCAAG AGATGGAAAA CCCATTAGCG CAAAAATTAC TGCGTGGCGA TTTACTGCCC
GGCAAACCGA TTAAGGTCAG TTGCGCCGGC GGTGAGTTGG TATTCGAGCA ATAA
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| Protein sequence | MRLDRMTNKF QLAISDAQSL ALGRDHQFIE PLHLMMALLN QDSGSIHPLL TQAGIRVSAL
RSLLSQELER LPQVEGTGGD VQLSQGLIRL LNLCDKLAQK RKDKYISSEL FVLAALEGSD
ALAQCLKKSG ATKELLEQTI EQVRGGQNVD DPNAEDQRQA LKKFTVDLTE RAEQGKLDPV
IGRDDEIRRT IQVLQRRSKN NPVLIGEPGV GKTAIVEGLA QRIVNGEVPE GIKNKRVLSL
DMGALIAGAK YRGEFEERLK AVLNELAQEE GQVILFIDEL HTMVGAGKGD GAMDAGNMLK
PALARGDLHC VGATTLDEYR QYIEKDAALE RRFQKVLVDE PSVEDTIAIL RGLKERYELH
HHVEITDPAI VAAATMSHRY VSDRKLPDKA IDLIDEAASS IRMQMDSKPE SLDRLERRAI
QLKLEEQALA KENDEASRRR LEHLRVELHE VEAKASELNE IWRTEKAALA GTQHIKADLE
QARMDLEVAR RAGDLTRMSE LQYGRIPELE KQLDLASQAE MQDMTLLRNK VTDLEIAEVL
SKATGIPVSK MLEGEREKLL QMEVALHERV IGQNEAVDAV ANAIRRSRAG LADPNRPIGS
FLFLGPTGVG KTELCKSLAK FLFDTESALV RIDMSEFMEK HAVSRLVGAP PGYVGYEEGG
YLTEAVRRKP YSVILLDEVE KAHPDVFNIL LQVLDDGRLT DGQGRTVDFR NTVIIMTSNL
GSDIIQEGFG HLSYSEMKSA VMNVVTHSFR PEFLNRIDES VVFHPLDAEN IKHIASIQIA
SLRKRLAEKD YTLEITDEAL SLIAEIGFDP VYGARPLKRA LQQEMENPLA QKLLRGDLLP
GKPIKVSCAG GELVFEQ
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