| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3165 |
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| Symbol | |
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| ID | 4477759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3797220 |
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| End bp | 3799055 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639727769 |
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| Product | oxaloacetate decarboxylase |
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| Protein accession | YP_870795 |
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| Protein GI | 117921603 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG5016] Pyruvate/oxaloacetate carboxyltransferase |
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| TIGRFAM ID | [TIGR01108] oxaloacetate decarboxylase alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.668035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGAG TAAATTCGAT TGTGGCGTCT AAGCCATTAC AGTTAACCGA TGTTGTTTTG
AGGGATGCAC ATCAGTCTAT TTTAGCAACG CGTTTACGCA TTGATGACAT GCTTCCGATT
GCACCTCTGC TAGATAAAGT GGGATTTTGG TCGCTCGAGT CTTGGGGCGG AGCGACCTTC
GATGCCTGTA TCCGTTATTT GGGTGAGGAC CCTTGGGACA GGATCCGCGA ACTGAAAAAG
TTAATGCCTA ATACGCCTCA ACAAATGTTG TTGCGCGGAC AAAACCTTTT GGGTTATCGC
CATTATGCCG ATGATTTAGT GACACGTTTT GTCGAACGTG CCCATGCCAA TGGGGTCGAT
GTGTTCCGTA TCTTTGATGC GATGAATGAT GTGCGTAACC TCGAGATGGC GGTAAAGGCG
GTGCGTGATG TCGGTGGGCA CGCGCAGGGC ACAATTTCTT ATACGACCAG CCCTGTTCAT
ACGGTTAATA CATGGGTCGA TATGGCAAAG CGTCTTGAGG ACATGGGCTG CCATTCGCTG
TGCATTAAAG ATATGGCGGG TCTACTCAAG CCGATGGAAG CCTTTGAGCT TATCAGTCGC
TTAAAATCAC AAACTCAACT CATGCTCTCA TTGCATTGTC ACGCCACCAC TGGCCTGAGC
ACTGCTACCT ATCAAAAGGC GATAGAGGCG GGAATCGATG TGCTCGATAC CGCGATTTCT
TCCATGAGCC AAACCTATGG TCATACGGCA ACTGAAACTG TGGTTGCCAT GGTGGCAGAG
ACTGAGCGTG ATACTCACTA TGACCTTGCC TTACTAGAGG AAATTGCCGC CTATTTCCGT
GAGGTGCGGA AAAAGTACGC CAAGTTTGAA GGAGCATTAA AGGGCATTGA TTCGCGCATT
CTTCGTGCTC AAGTGCCCGG TGGCATGTTG ACGAATATGG AGAGTCAGCT CAAAGAACAA
GGCGCGGCTG ATAAGCTCGA TGCTGTGCTG GAGGAGATCC CTAGGGTACG TCAGGATTTA
GGTTTTCTGC CTTTGGTTAC GCCAACCTCG CAAATTGTTG GCTCTCAGGC GGTTATCAAC
GTACTGATGG GGCAAAGATA TCAATCGTTG ACGAAAGAGA CTGAAGGCGT GTTAAGGGGC
GAATATGGCG CCACTCCAGC CCCGGTTAAT CCCGAGTTGC AGGCCAGAGT GCTAAACGGC
GCGGCGGCGA TAACCTGCCG TCCTGCGGAT TTACTCGCAC CAGAGTTGGA CAAACTGCGT
ACGGAGTTAT TATCAAAGGC GCAGGACCAA GGGATTAGTC TCGTCTCTGA GAGTAATGAA
AAGTCTTTGG ATGATGATTT ACTCATCTAT GCGCTCTTCC CGCAGATTGG TTTACAGTTT
TTAAAGCACC GTCACGATCC AACCGCCTTT GAACCTAAAC CTGAACTTGC GCCAGTGTTG
CCTGCTACGC CGCGAGAGGC CGAAACCTAT ACCGTCATGG TTGAGGGGCA AACTTATGTG
GTTGAAGTCG CCGAGGGTGG CGAAATCAGT CAAATCCAAG CTCAAGGGCA AGCAGCACAG
CAGCTTGGTC AAGCTAATCC TTATCAGTCG AGTGCTGCGT CAGTACCTCA AACCAGTGAA
GTGAAACTTA AGATGAGCGC GCCACTATCG GGCAATATCT TCAAAGTGCA TGTCGGCATT
GGTGACAAGG TGTGCGCCGG CGATGTTGTT ATCATCCTAG AGGCCATGAA AATGGAGACT
GAAATCCGCG CTCAGGGAGA TGGCATTATT ACCCATCTCT TTGTGAAAGA AGGGGATTCG
GTTGCCGTGG GTTCTCAATT ACTGGCCTTA GCTTAG
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| Protein sequence | MNRVNSIVAS KPLQLTDVVL RDAHQSILAT RLRIDDMLPI APLLDKVGFW SLESWGGATF
DACIRYLGED PWDRIRELKK LMPNTPQQML LRGQNLLGYR HYADDLVTRF VERAHANGVD
VFRIFDAMND VRNLEMAVKA VRDVGGHAQG TISYTTSPVH TVNTWVDMAK RLEDMGCHSL
CIKDMAGLLK PMEAFELISR LKSQTQLMLS LHCHATTGLS TATYQKAIEA GIDVLDTAIS
SMSQTYGHTA TETVVAMVAE TERDTHYDLA LLEEIAAYFR EVRKKYAKFE GALKGIDSRI
LRAQVPGGML TNMESQLKEQ GAADKLDAVL EEIPRVRQDL GFLPLVTPTS QIVGSQAVIN
VLMGQRYQSL TKETEGVLRG EYGATPAPVN PELQARVLNG AAAITCRPAD LLAPELDKLR
TELLSKAQDQ GISLVSESNE KSLDDDLLIY ALFPQIGLQF LKHRHDPTAF EPKPELAPVL
PATPREAETY TVMVEGQTYV VEVAEGGEIS QIQAQGQAAQ QLGQANPYQS SAASVPQTSE
VKLKMSAPLS GNIFKVHVGI GDKVCAGDVV IILEAMKMET EIRAQGDGII THLFVKEGDS
VAVGSQLLAL A
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