Gene Shewana3_3162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3162 
Symbol 
ID4477756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3793737 
End bp3794162 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content49% 
IMG OID639727766 
Producthypothetical protein 
Protein accessionYP_870792 
Protein GI117921600 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAT TAAGCATGAT GTTTTCTGGG GCTTTTTTAG CCGCGACCTT GTTACCGGGA 
GGATCAGAAG TTTTACTGAT TGCGTTGCTG AATAAAGCGC CGCAAGTTTG GGTCGCATTA
GTGGTGGTGG CCAGTGTGGG CAATACCTTA GGGGCGATGA CAAGTTTTTA TCTAGGGCGG
TTCGGTCGGT TTGCAAAGTG CCCCGAGGCC CTAAGTGAGG GAAAGCAAGC CAAAGCCTTA
GCCATTATTG AGCGTTACGG TGTTTGGTCG TTATTGTTGT CGTGGGCGCC AGTGATTGGC
GATCTATTAT GTTTATTGGC GGGATGGTTG AAGCTTCGGG CGTTCCCCGC ATTAGTGATG
ATTTTGATCG GCAAAACCCT GCGTTACCTT ATTGTGGCGG CCGCCACATT ACATTGGTTT
AGTTAG
 
Protein sequence
MSELSMMFSG AFLAATLLPG GSEVLLIALL NKAPQVWVAL VVVASVGNTL GAMTSFYLGR 
FGRFAKCPEA LSEGKQAKAL AIIERYGVWS LLLSWAPVIG DLLCLLAGWL KLRAFPALVM
ILIGKTLRYL IVAAATLHWF S