| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3155 |
|---|
| Symbol | |
|---|
| ID | 4477749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 3784624 |
|---|
| End bp | 3785115 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639727759 |
|---|
| Product | phosphoribosylaminoimidazole carboxylase, catalytic subunit |
|---|
| Protein accession | YP_870785 |
|---|
| Protein GI | 117921593 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
|---|
| TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0258648 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.930298 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCCC TTGTTGCTGT TGTTATGGGT TCTAAGAGTG ATTGGCCCAC AATGGAAGCC
GCCGCTGAGA TCATGGATAA ACTGCAAGTG CCTTACCATG TTGAAGTCGT ATCTGCCCAT
AGAACGCCAG ATAAACTGAT GGAGTTTGCA GCCGGAGCCG CTGACCGTGG TTTTAAAATT
ATTATCGGTG GTGCGGGCGG TGCTGCTCAC TTACCCGGTA TGATTGCCTC AAAAACTCGC
TTACCCGTAT TAGGTGTACC AGTACAAAGC AAAGCGCTGT CGGGCATGGA TAGCTTACTG
TCTATCGTGC AGATGCCAAA AGGCATTGCC GTTGGCACTC TGGCCATCGG AACCGCAGGT
GCCTTTAACG CCGGTCTACT CGCCTGCCAA ATCTTAGCCA ATAACGATGC TGAACTTGCC
GCACGTTTAG AAGCCTTTAG AGAAGAACAA ACCCGCGCAG TGCTGGACAA TCCCGACCCG
AGGGAAGCCT AA
|
|---|
| Protein sequence | MQALVAVVMG SKSDWPTMEA AAEIMDKLQV PYHVEVVSAH RTPDKLMEFA AGAADRGFKI
IIGGAGGAAH LPGMIASKTR LPVLGVPVQS KALSGMDSLL SIVQMPKGIA VGTLAIGTAG
AFNAGLLACQ ILANNDAELA ARLEAFREEQ TRAVLDNPDP REA
|
|---|
| |