| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3152 |
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| Symbol | |
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| ID | 4477746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3779894 |
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| End bp | 3780496 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639727756 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_870782 |
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| Protein GI | 117921590 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.269605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.607127 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCCTGG CGATACCGCA AATGCATGCC CATGAGCATA CCGATGAACA GTTAATGCAA
CGCTATGCCA AGGGCGATGG CAAAGCGTTT GAGCAGCTTT ATCTTAAACA CAAAGGCGCT
TTGTACCGTT ACTTTGTGCG CCAACTCGGC GACAAACAGT TAGCCGAAGA TTTATATCAA
GAAACCTGGG GACGGGTGAT CCGTGCCGCC GCCAACTATG AGCCGAGCGC CAAGTTTAAT
ACTTGGCTCT ATCGGATTGC CCATAATCTG TTGATTGACC ATGTCAGGGC GGTTAAGCCC
GTCGACTTAG TCAGCCATGA TAATGAGGAA GGGCTAGATA CCTTTGTGGG AGCAGAGCAG
GAACAACCCG ATGTGCATTG GCAGGAAACG CAAAAGAGTC TGTTGCTTAA AACCTGTATA
GCTCTGTTAC CCCAAGTGCA GAAAGAGGCC TTTATTCTCA ATATCGAAAT GGGCTTTACC
GCAGCGGTGA TCAGCGATAT TGCTGGGGTG ACACTCGAGG CGACTAAAAG CCGTATTCGT
TACGCATATC AAAGCTTAAA AGATTGTGTC AATGCTAAAT GGCAGGAGGT TGGTCATGAG
TAA
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| Protein sequence | MALAIPQMHA HEHTDEQLMQ RYAKGDGKAF EQLYLKHKGA LYRYFVRQLG DKQLAEDLYQ
ETWGRVIRAA ANYEPSAKFN TWLYRIAHNL LIDHVRAVKP VDLVSHDNEE GLDTFVGAEQ
EQPDVHWQET QKSLLLKTCI ALLPQVQKEA FILNIEMGFT AAVISDIAGV TLEATKSRIR
YAYQSLKDCV NAKWQEVGHE
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