Gene Shewana3_3150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3150 
Symbol 
ID4477744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3778435 
End bp3778971 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content42% 
IMG OID639727754 
Producthemerythrin HHE cation binding domain-containing protein 
Protein accessionYP_870780 
Protein GI117921588 
COG category[S] Function unknown 
COG ID[COG3945] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.024365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.772285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAAAA GACTCATGCA TGATCATAAA CATATAGCAG TTTTATTGAA TGTCTTGAAA 
AACAAGCAGA TGAAATTAGC TGAAGGTGAG GCGATTAATT TTATCGTGGT TCGGGACATA
GTAGAGTATA TGCAAGGATA TGCTGAGCGT AGCCATCATC CTGTTGAAGA CATTATCTAT
GCTTATTATT TGGCAAATAA GGCAAATGAT GAAATCGATA AGCTTAGCGC CGAGCATCAA
GTAGTAACCG CAGCCTCCTC GGCATTAATG AATACCTTGA ATTTGATCCT GAGTGACATA
GTAGTCGCGA GGGATAAATT GGTGGCTGAT TTTGCCGAAT ATGTCGACCT GCAAGAAAAG
CATATGCAAA TGGAAGAGCG GGAAATCTTC CCCCTGCTGG CTAAAACCTT AACCGATAAG
GATTGGCACC TTATTGAGCA GCAATGCCAA GCCTCGTTAA TCGATGATCC GTTATTCCTC
GACCGTGAGC AACAGGCCTT TGATGAGTTG CGTTCTTATC TCAGGACAGC TGAGTAG
 
Protein sequence
MLKRLMHDHK HIAVLLNVLK NKQMKLAEGE AINFIVVRDI VEYMQGYAER SHHPVEDIIY 
AYYLANKAND EIDKLSAEHQ VVTAASSALM NTLNLILSDI VVARDKLVAD FAEYVDLQEK
HMQMEEREIF PLLAKTLTDK DWHLIEQQCQ ASLIDDPLFL DREQQAFDEL RSYLRTAE