Gene Shewana3_3147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3147 
Symbol 
ID4477741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3775351 
End bp3776307 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content46% 
IMG OID639727751 
Producttransaldolase B 
Protein accessionYP_870777 
Protein GI117921585 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00874] transaldolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000170325 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAATA CATTAGAGCA ACTCAAGTCA TACACTACGA TTGTGGCCGA TACTGGCGAT 
ATTGAAGCGA TCAAACGCTA TCAGCCAGAA GACGCAACGA CCAACCCATC ACTCATCTTA
AAAGCGGCTC AAATCCCCGA GTATAGAGCT CTAATCGACA ATGCCATTGC ATGGGCTAAA
TTACAAAGTG CTGATATTGA GCAACAGATT GATGATGCCA GCGATAAGCT TGCCGTGAAC
ATTGGCGTGG AAATTCTGAA ACTGGTTCCA GGCCGTATTT CAACTGAAGT CGATGCCCGC
TTATCCTTCG ATAAAGAAAA ATCCATTGCG AAAGCGCACA AACTAGTGCG TCTGTACCAA
GAAGCTGGCG TGGATAAATC TCGCATTCTG ATCAAATTAG CCTCAACTTG GGAAGGCATT
TGTGCCGCCA AAGAGTTAGA GCAAGAAGGC ATCAACTGTA ACTTAACCCT ACTATTTAGC
TTCGCTCAAG CGCGTGCCTG TGCTGAAGCT GGCGTGTACT TAATTTCTCC ATTCGTTGGC
CGCATCCTCG ACTGGTACAA AAATGATACA GGTAAAGACT ATGACGCCGT AAATGATCCT
GGTGTCGTTT CTGTGACTGA AATTTACAAC TACTACAAAC AGCATGGCTA TAACACGGTA
GTTATGGGTG CAAGTTTCCG TAATATCGGT GAAATCATCG AATTAGCGGG TTGTGACCGC
CTGACTATTG GCCCTTCATT ACTCGAAGAG CTGGCAAACT CTCAAGTTGC TATTCAACCT
AAACTGCTTC CTGCCAGCAC CACGGTTGCT GCGGGTGAAC CTTTAACCGA AGCGCAATTC
CGCTGGGACT TCAACCAAGA TCCTATGGCT GTCGACAAGT TAGCAGAAGG CATCCGTAAC
TTCGCCATCG ACCAAGGTAA ACTCGAAGTC ATGCTCAAGG CAAAACTGGC AAACTAA
 
Protein sequence
MANTLEQLKS YTTIVADTGD IEAIKRYQPE DATTNPSLIL KAAQIPEYRA LIDNAIAWAK 
LQSADIEQQI DDASDKLAVN IGVEILKLVP GRISTEVDAR LSFDKEKSIA KAHKLVRLYQ
EAGVDKSRIL IKLASTWEGI CAAKELEQEG INCNLTLLFS FAQARACAEA GVYLISPFVG
RILDWYKNDT GKDYDAVNDP GVVSVTEIYN YYKQHGYNTV VMGASFRNIG EIIELAGCDR
LTIGPSLLEE LANSQVAIQP KLLPASTTVA AGEPLTEAQF RWDFNQDPMA VDKLAEGIRN
FAIDQGKLEV MLKAKLAN