Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3147 |
Symbol | |
ID | 4477741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3775351 |
End bp | 3776307 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639727751 |
Product | transaldolase B |
Protein accession | YP_870777 |
Protein GI | 117921585 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000170325 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAATA CATTAGAGCA ACTCAAGTCA TACACTACGA TTGTGGCCGA TACTGGCGAT ATTGAAGCGA TCAAACGCTA TCAGCCAGAA GACGCAACGA CCAACCCATC ACTCATCTTA AAAGCGGCTC AAATCCCCGA GTATAGAGCT CTAATCGACA ATGCCATTGC ATGGGCTAAA TTACAAAGTG CTGATATTGA GCAACAGATT GATGATGCCA GCGATAAGCT TGCCGTGAAC ATTGGCGTGG AAATTCTGAA ACTGGTTCCA GGCCGTATTT CAACTGAAGT CGATGCCCGC TTATCCTTCG ATAAAGAAAA ATCCATTGCG AAAGCGCACA AACTAGTGCG TCTGTACCAA GAAGCTGGCG TGGATAAATC TCGCATTCTG ATCAAATTAG CCTCAACTTG GGAAGGCATT TGTGCCGCCA AAGAGTTAGA GCAAGAAGGC ATCAACTGTA ACTTAACCCT ACTATTTAGC TTCGCTCAAG CGCGTGCCTG TGCTGAAGCT GGCGTGTACT TAATTTCTCC ATTCGTTGGC CGCATCCTCG ACTGGTACAA AAATGATACA GGTAAAGACT ATGACGCCGT AAATGATCCT GGTGTCGTTT CTGTGACTGA AATTTACAAC TACTACAAAC AGCATGGCTA TAACACGGTA GTTATGGGTG CAAGTTTCCG TAATATCGGT GAAATCATCG AATTAGCGGG TTGTGACCGC CTGACTATTG GCCCTTCATT ACTCGAAGAG CTGGCAAACT CTCAAGTTGC TATTCAACCT AAACTGCTTC CTGCCAGCAC CACGGTTGCT GCGGGTGAAC CTTTAACCGA AGCGCAATTC CGCTGGGACT TCAACCAAGA TCCTATGGCT GTCGACAAGT TAGCAGAAGG CATCCGTAAC TTCGCCATCG ACCAAGGTAA ACTCGAAGTC ATGCTCAAGG CAAAACTGGC AAACTAA
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Protein sequence | MANTLEQLKS YTTIVADTGD IEAIKRYQPE DATTNPSLIL KAAQIPEYRA LIDNAIAWAK LQSADIEQQI DDASDKLAVN IGVEILKLVP GRISTEVDAR LSFDKEKSIA KAHKLVRLYQ EAGVDKSRIL IKLASTWEGI CAAKELEQEG INCNLTLLFS FAQARACAEA GVYLISPFVG RILDWYKNDT GKDYDAVNDP GVVSVTEIYN YYKQHGYNTV VMGASFRNIG EIIELAGCDR LTIGPSLLEE LANSQVAIQP KLLPASTTVA AGEPLTEAQF RWDFNQDPMA VDKLAEGIRN FAIDQGKLEV MLKAKLAN
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