Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3140 |
Symbol | rpsT |
ID | 4477734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3766359 |
End bp | 3766625 |
Gene Length | 267 bp |
Protein Length | 88 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639727744 |
Product | 30S ribosomal protein S20 |
Protein accession | YP_870770 |
Protein GI | 117921578 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0268] Ribosomal protein S20 |
TIGRFAM ID | [TIGR00029] ribosomal protein S20 |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000322066 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCTAATA GCAAGTCTGC AAAGAAGCGC GCGCTTCAAT CTGAAAAGCG TCGTCAGCAC AACGCCAGCC GTCGCTCAAT GTTACGTACA TACGTTAAAA AAGTAATCGC TGCTATCAAA GCTGGCGATC ACAAAACAGC AACTGAAGCT TTCGCTGCTG CACAACCAAT CGTTGACCGT ATGGCGACTA AAGGCCTTAT TCACAAGAAT AAAGCTGCCC GTCATAAGGC TCGTTTGAAC GCTAAGATCA AAGCACTGGC TGCTTAA
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Protein sequence | MANSKSAKKR ALQSEKRRQH NASRRSMLRT YVKKVIAAIK AGDHKTATEA FAAAQPIVDR MATKGLIHKN KAARHKARLN AKIKALAA
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