| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3132 |
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| Symbol | |
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| ID | 4477726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3758013 |
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| End bp | 3758573 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639727736 |
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| Product | type IV pilus modification protein PilV |
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| Protein accession | YP_870762 |
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| Protein GI | 117921570 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4967] Tfp pilus assembly protein PilV |
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| TIGRFAM ID | [TIGR02523] type IV pilus modification protein PilV
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAAT TCGAACGATT GACGCATAAC AGAATTCAAA GGGGCTTCTC TTTAATTGAA
GTGCTTGTCG CATTGGTGAT TCTAGTGATT GGCTTGATCG GTATTTTTAA TTTACACATT
GTGGCTAAAC GCGGCAGCTT TGAATCCTTT CAGCAAACAC AAGCCTCCTA TTACGCCAAT
GATATTATCA ACCGCATGAA GCTAAACCGA ACACAGCTTG ATAGCTATGC CGGAGAATAC
ACTGGCGCCC CAAGTTCTGT CGCAAAGGTG TGTGAAAACA CAACACTTTG CAATCCAACA
GAATTGAAGT TGTGGGATAT TTTTGAATGG CAATCTTCGT TAACCGGAGA GTCTGAGACT
GTTGGCACTC AAAACGTTGG GGGATTGGAC TCTCCTACGG CTTGTATTGA AGTGAATAAT
CGTGATGTGC TCGTTGTGAT TACTTGGCGA GGTATACGCG AGACCAATAT TGATACCTCA
GCCGTTGCAG ATGCTGCAGA CACTTGTGGT GCTGACACTA AAAATAGGCG CATTTTTTCA
CTTAAGACAG TGATTATTTA G
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| Protein sequence | MTKFERLTHN RIQRGFSLIE VLVALVILVI GLIGIFNLHI VAKRGSFESF QQTQASYYAN
DIINRMKLNR TQLDSYAGEY TGAPSSVAKV CENTTLCNPT ELKLWDIFEW QSSLTGESET
VGTQNVGGLD SPTACIEVNN RDVLVVITWR GIRETNIDTS AVADAADTCG ADTKNRRIFS
LKTVII
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