| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3125 |
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| Symbol | |
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| ID | 4477719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3751153 |
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| End bp | 3751665 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639727729 |
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| Product | methylation site containing protein |
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| Protein accession | YP_870755 |
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| Protein GI | 117921563 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.287343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACTC TACCACATGG CTTTAGCCTG ATTGAACTCA TCACTACGGT ATCCATTTCG
ACCATTCTGT TATCGATTGG CGCTCCCTCG TTAAGCGATT TCAACACAAG ATTCAGAGCT
GATAGTAATA TCAAAGTCAT CCAGCAAACA CTAATGCTCG CCCGAAATCA TGCCATTTCC
TTCAATCGAA AAGTGACAGT CTGTGCCTTA AGCAACAATC AGTGCACATC TAACTGGCAG
CTTGGTTTAA CGGTATTTAT TGATGTAAAC AGCAATAGTC AACTTGATGG CAATGAAACG
ACTATTTTTA CCACTAACGC TTTCAATGCC AGTGATATTG TCATCTACAA TCGAACCTCA
ATTCGTTTTC AACCAGACGG TCTTGCCTCT GGTACTAATG GAACATTGAA GTATTGTCCA
TCAAGTCCCA CGAGCCCTTA CTCGCGAGGG ATTGTGGTAA ATCAAGCTGG CAGGGCAAGA
CTATCGACAG ATGCCAATAT CCGCTGCGGA TAA
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| Protein sequence | MKTLPHGFSL IELITTVSIS TILLSIGAPS LSDFNTRFRA DSNIKVIQQT LMLARNHAIS
FNRKVTVCAL SNNQCTSNWQ LGLTVFIDVN SNSQLDGNET TIFTTNAFNA SDIVIYNRTS
IRFQPDGLAS GTNGTLKYCP SSPTSPYSRG IVVNQAGRAR LSTDANIRCG
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