| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3121 |
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| Symbol | |
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| ID | 4477715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3744928 |
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| End bp | 3747591 |
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| Gene Length | 2664 bp |
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| Protein Length | 887 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639727725 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_870751 |
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| Protein GI | 117921559 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.985305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACCAT CATCCTTTAA GAAAAGTGTA CTAGCTACAA ACATTGCTAT CCTACTCGGC
AGCGCTGTTT CAATCGGAGC TGTTGCTGCA GAGGCTGAAG CCGCCGCTGC GGCAACAGTG
CCTGAAAATA TTGAGAAAAT TGAAGTGCGT GGTATTCGTG CTTCAAACAA AGCCAATATC
AACGAAAAAC GATTTTCAAA TGCGGTTGTT GATGCTGTAA CGGCTGAAGA TATCGGTAAA
TTCCCTGATT CTGACGTAGG TCAAGCTTTA GGCCGCGTTC CAGGTGTGAC TGTTGGTCGC
ACATTTGGTC AAGGTAGCTC TGTTTCTATT CGCGGTACCG ATCCGTTAAT GACGTTGACT
ACGCTGAATG GTCAAAACGT TGCATCAACA GGTTGGTATG ATCAAATGAA CGTCGACCGT
TCATTCAACT ACTCTATGCT GCCATCAGAA CTGATTGGCG GTATGGAAGT GTATAAATCT
ACCCAAGCTA ACCTCGTTGA GGGTGGTATC GGTGGTACCG TTATTGTTAA GACTCGCAAA
CCATTAGATA TGGACGCTAA CTCTGTATTT GCCTCTGTTA AAGGTGAATA CGGTTCAGTG
AACGAAGATG TTGCACCTGA GTTATCTGGC TTATATAGCT GGAAAAACGA CGACGAAACC
TTCGGTGTCT TACTTGCTGG GTCATACATT GACCGTGAAT ATCTGCGTAC TGGTACTGAA
GCGGACCTCG ACTGGGGTGG CCGTTCTTCA GTTCAACCAT CAAGCTTTCT GCAAGAACAA
GAACGTACTG CGCTCGATGC AACTGTGCAA TTCCGTCCAA CAGACAATTT AGAGTTTGGT
GCTCACGTAC TGTCACTCAA GCTTGGTGCT GATAGTATTG GTGCCAACAT GTATATCGAA
ACTGACACTA ACTGGGGTGA AGGTGCTTCT CACTGTAAAC AGTTTAACGC AGCGGGTGTG
TGTACTCTGA GCGTCACTCC TGAAAGTGAC CCATCTAATG TGTTCTTCCA AAACTGGGCG
CGTAAAGGTG AAATGACGTC CGATACCTTT GAGTTAAATG CGGACTATAA AGGCGACGGT
TTTGCTATCT CTGGTGTAGC GGGTAAAACC AAGGCTGAAG GTGGTACTCA GATGAGTGCT
AACTTTGGTT ATGGTTGGTG GGGTGACAAG TTTGGTCAGG TGAAATGGGC GGGTACCGTT
GATGCAACGG GCAAGCAAAT TGATATCAAT GGCCGTGACA TGGGATTCAC CCAAGATCAA
CTAGACACTA CAGTGGGCAC TTCAACTTGG ACTGGTATTA AAGGTCCTAA CTCTGACGAA
GAAACTTATC TGCAGTTAGA TGTTGATTTT GATTTAGATT TTGGTGTTAT CAATAAGTTT
GAAACTGGTG TGCGTTACAC TCAACATGAA TTTGAAAAGA GTGAATACCG TGCAATTTAC
GATCCTGCTA AGAAGAATGA GTTCAAGACT TCAGATCTTT ACAGCGGCAC CATGAAGTTA
GGCTACGACG GTTGGACTAT TCCTAAAGCC GATCTGGATG CAATGATCAA CGCGACTGAA
TCTCTGGTTG ACCAATTTGC TTATAGCCGT TCAGCTTACG GCCTTATCGA AGAAGATAAC
TTCTCAATGT ACGGTATGTT CTCATTCGAT GGTGAAGGTT TCCGTGGTAA CTTCGGTTTA
CGCTACATTC AAACTGACGT GACTTCTAGC GGCCATATCA TCGATAACTC GCCTGCAGAC
ATTTTAGGTG TGAACCAAGG TTGGAGCGAA GAGATCCATA GCATCAGTGA CAGCTACAGC
GATGTGTTGC CAAGCTTTAA CATCTCTTTC GACCTTGCGC CTGATTTGAT CTTACGTATG
TCAGCAGGAC AAGCAATCAC TCGTCCTAAC TACGATAACT TGTTCTTATC AACATCAACT
GGTTATCCAG ATGATAGACG TGGTAACGAA GAGATCACCT ACGGTAATCC AGGCTTAAAG
CCAATGAAGT CTTCACAAGC TGACTTAAGC CTTGAATACT ACTATGGCGA TGGCAACTTA
GTTTCTGCGA CTTACTTTAT CAAAGATATC AGTAACTTCA TTGTTGCAAC TACCCAATAT
AATCAACAGA TTGGCGTCGT GAACAATGAC TTAGAAACCC CTGCCGATAA TTGGACTGTA
AATAATTATG AAAACGCGGG TGGTGGTGAG ATCGATGGTA TCGAGTTACA GTTAAACCAC
GCTTTCGAAA ATGGTTTCGG TGTTAACGCC AACTATACCT ACGCAGATGG TACCGCTCCT
GCTGAAGTGT ACACTGATAA CATTGGTATG TTTACTGAGT CCTCTAAGCA CAGTGCTAAC
TTAGTGGGTT ACTGGGAAAA TGATGATTTC TCAGCTCGTG CAGCTTACAA CTGGCGCTCT
GAGTACATGG TGCGTGAATA CGGTAAATAC TATGGTAACC GCATGCACGA TGCCTTTGGT
ACTCTGGATG TGACTTTAGG TTGGAACGTG ACAGAAGCCA TTGCTTTACG TCTTGAAATT
GTTAACTTAA CCGCTGAAGA CGATGTGCAA TATGGTGCAG CGGGTGTAGG TACAGAAGTT
AAACCTGCAC TACAAGACGA TTTCCCTGCA TGGTCATTTA AAGGCGAAAC GACCTATAAG
TTAGGTGCAA GTTTCGTATT CTAA
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| Protein sequence | MRPSSFKKSV LATNIAILLG SAVSIGAVAA EAEAAAAATV PENIEKIEVR GIRASNKANI
NEKRFSNAVV DAVTAEDIGK FPDSDVGQAL GRVPGVTVGR TFGQGSSVSI RGTDPLMTLT
TLNGQNVAST GWYDQMNVDR SFNYSMLPSE LIGGMEVYKS TQANLVEGGI GGTVIVKTRK
PLDMDANSVF ASVKGEYGSV NEDVAPELSG LYSWKNDDET FGVLLAGSYI DREYLRTGTE
ADLDWGGRSS VQPSSFLQEQ ERTALDATVQ FRPTDNLEFG AHVLSLKLGA DSIGANMYIE
TDTNWGEGAS HCKQFNAAGV CTLSVTPESD PSNVFFQNWA RKGEMTSDTF ELNADYKGDG
FAISGVAGKT KAEGGTQMSA NFGYGWWGDK FGQVKWAGTV DATGKQIDIN GRDMGFTQDQ
LDTTVGTSTW TGIKGPNSDE ETYLQLDVDF DLDFGVINKF ETGVRYTQHE FEKSEYRAIY
DPAKKNEFKT SDLYSGTMKL GYDGWTIPKA DLDAMINATE SLVDQFAYSR SAYGLIEEDN
FSMYGMFSFD GEGFRGNFGL RYIQTDVTSS GHIIDNSPAD ILGVNQGWSE EIHSISDSYS
DVLPSFNISF DLAPDLILRM SAGQAITRPN YDNLFLSTST GYPDDRRGNE EITYGNPGLK
PMKSSQADLS LEYYYGDGNL VSATYFIKDI SNFIVATTQY NQQIGVVNND LETPADNWTV
NNYENAGGGE IDGIELQLNH AFENGFGVNA NYTYADGTAP AEVYTDNIGM FTESSKHSAN
LVGYWENDDF SARAAYNWRS EYMVREYGKY YGNRMHDAFG TLDVTLGWNV TEAIALRLEI
VNLTAEDDVQ YGAAGVGTEV KPALQDDFPA WSFKGETTYK LGASFVF
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