Gene Shewana3_3117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3117 
Symbol 
ID4477711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3740245 
End bp3741234 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content50% 
IMG OID639727721 
Producthypothetical protein 
Protein accessionYP_870747 
Protein GI117921555 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000955559 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTATTC ATATTGCTAC ACTGCTTGGC AGCGTAGTAA CGACTCTCGC TAAACGTTTG 
TTGATGCTCA TCCTTGGATT CTGGGCGAAC GCTATGGTTT GTGCTTTCAG TTTCATTGCG
ATAGCCGCAG TGGCATCCGC GTCGTTTATG CTTGCAAATG CCGCCTATGC GGCTGGCACT
TCTTCGGCAA GCAATCCCGC TCCCATCAAG ATAGTGACCA CCATCCAACA GCAATGGCAG
TTTAATCTCC TCAAAGAGGC GCTGCGCCGC TCTGGTCAGT CCTATCAGGT CGAGCAAATG
TCGACGCAGA TGAACCAAAA ACGTAAGGTC GAAGAAGCGC TGGCTGGTAC AGTCGATGTT
TTTTGGAGCA TGACTTCCAA GGAGCTTGAG GAAACCGTGC TCCCGGTTCG TATCCCCTTG
TTTAAGGGAT TACTCGGTAA CCGCCTGTTA ATTATCCGCA AAACGGATGA GGCCAGATTT
GCCAATGTAA AAACGCTGGC GGATTTTAAG CAATTAAAAG CGGGACAAAA CCGCTATTGG
CCCGATGCCA GCATCCTCGA AGCCAATGGT TTGCCTGTCG TGACTAGCTA TCAATACACC
AATCTCTATC CGATGTTAGA GGGCGGCCGA TTCGATTACC TCGCCCTCGG CGCACAGGAA
ATTGGCGATG AGCTCGCAAG CCACCCCGAT CCCGCGCTGA AAATCGATAC TCACATCCTG
CTGCAATATC GATCGCCGGC ATATTTTTTT GTGTCCCCAA AACGTCCCGA GTTAGCGGCG
GCAATCTTAG CGGGGCTCGA AAATATGATA AGCGACGGCA GCTTCGACGA GATGTTTAAT
CGCGAGCTTA AGATAGACAA GCTCTACCGT GATGCCCAGT TTGAGCAGCG CGTCATTATT
CGTCTCGATA CGCCCGATTT AAGTCCCTTA ACCCCCATTG AACGCCAAGA GTTGTGGTTA
GATCTATTTA GTATGCAAGG TGCAAAATAA
 
Protein sequence
MVIHIATLLG SVVTTLAKRL LMLILGFWAN AMVCAFSFIA IAAVASASFM LANAAYAAGT 
SSASNPAPIK IVTTIQQQWQ FNLLKEALRR SGQSYQVEQM STQMNQKRKV EEALAGTVDV
FWSMTSKELE ETVLPVRIPL FKGLLGNRLL IIRKTDEARF ANVKTLADFK QLKAGQNRYW
PDASILEANG LPVVTSYQYT NLYPMLEGGR FDYLALGAQE IGDELASHPD PALKIDTHIL
LQYRSPAYFF VSPKRPELAA AILAGLENMI SDGSFDEMFN RELKIDKLYR DAQFEQRVII
RLDTPDLSPL TPIERQELWL DLFSMQGAK