| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3111 |
|---|
| Symbol | |
|---|
| ID | 4477827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 3731226 |
|---|
| End bp | 3732413 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639727715 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_870741 |
|---|
| Protein GI | 117921549 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4299] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.660738 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACGA CTGCGCCGGA ATCTATCACC AATACGGGCG TGAATGCTCA GGAGGCTGCC
GCGAAAAAGC GTCAGTCAAA ACCGCGGTTG ATGTCCCTCG ATGCCCTGCG TGGCTTCGAT
ATGTTTTGGA TTCTAGGTGG TGAAGCCCTA TTTGGCGCCT TGCTTATGTT GACGGGCTGG
GCGGGCTGGC AATGGGGTGA TACCCAAATG CATCATAGTG AGTGGAATGG GTTTCGCTTC
TATGATTTGA TTTTTCCGCT GTTTATTTTC CTTTCCGGTG TTGCCCTTGG ATTATCGCCA
AAACGCTTAG ATAAACTGCC GATGCAGGAG CGTATGCCTG TGTATCGACA CGGAATAAAG
CGACTGTTTC TTTTGTTGTT GCTTGGCATT CTTTATAACC ATGGTTGGGG AACCGGGGCG
CCTGCCGATC CTGAAAAAGT CCGTTATGCC AGCGTATTAG GTAGAATTGC CTTTGCATGG
TTCTTCGCCG CCTTGCTGGT GTGGCATACC AGTTTACGGA CCCAAGTGCT GGTGGCCTTG
GGCATCTTAG TGGCCTATGG CGCGGTGCAA CTCTGGTTGC CGTTTCCTGG TGGACAGGCT
GGTGTGTTAT CACCGACTGA GTCAATCAAT GCTTATGTGG ATAGCCTGTT ACTGCCGGGT
GTGAGTTATC AAGGACGAAC GCCCGATCCT GAAGGCGTGT TATCGACACT GCCCGCCGTA
GTCAACGCCT TAGCGGGTGT GTTTGTCGGT CATTTTATTG TGAAATCCCA TCCTAAAGGG
GAGTGGGCTA AGGTTGGCCT CTTGAGCGTT GCCGGTGGTG TTTGTTTGGC CCTAGGCTGG
TTGCTGGGTG GGGTTATTCC CGTCAATAAA GAGCTGTGGA CCAGCTCTTT TGTGTTGGTC
ACTAGCGGTT GGAGCATGCT GCTGTTAGCA CTATTTTATG CCCTTGTGGA TGTGCTGAAA
TGGCAAAAGC TCGCCTTTAT TTTTGTGGTG ATAGGCACTA ACGCCATCAT TATTTATCTG
GCCTCCAGCC TAGTGGATTG GAAGTATATC GCCCAGAGTG TGTTCGGTGG CGTTATCGCG
GTATTGCCGG AAAATGCTCA GCCCTTAGGA GCTGTGATTG GTTTGCTCAC CGTTCAATGG
TTAGTGCTGT ATTGGATGTA TCGTCGCAAC ATTTTTGTGC GGATCTAA
|
|---|
| Protein sequence | MSTTAPESIT NTGVNAQEAA AKKRQSKPRL MSLDALRGFD MFWILGGEAL FGALLMLTGW
AGWQWGDTQM HHSEWNGFRF YDLIFPLFIF LSGVALGLSP KRLDKLPMQE RMPVYRHGIK
RLFLLLLLGI LYNHGWGTGA PADPEKVRYA SVLGRIAFAW FFAALLVWHT SLRTQVLVAL
GILVAYGAVQ LWLPFPGGQA GVLSPTESIN AYVDSLLLPG VSYQGRTPDP EGVLSTLPAV
VNALAGVFVG HFIVKSHPKG EWAKVGLLSV AGGVCLALGW LLGGVIPVNK ELWTSSFVLV
TSGWSMLLLA LFYALVDVLK WQKLAFIFVV IGTNAIIIYL ASSLVDWKYI AQSVFGGVIA
VLPENAQPLG AVIGLLTVQW LVLYWMYRRN IFVRI
|
|---|
| |