Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3104 |
Symbol | |
ID | 4477820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3723013 |
End bp | 3723408 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639727708 |
Product | rare lipoprotein A |
Protein accession | YP_870734 |
Protein GI | 117921542 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTCTCA AATACTTATC TTTGACCTTA ATGCTGCTAG CCACCTTGGC CTTATCGGGG TGTTCTTCTA CCCATTCGGG AAACTGGCAG GGGTTTACTG AATCTGGCCA AGCTTCTTTC TACGGCGATA AACATCAAAA TAAGAAAACC GCCAGCGGTG AGCGTTATAA CCATAAATTA AAAACGGCTG CCCATAAGGA AATTCCTTTT GGTTCAGTAG TTAAAGTCAC CAATCTTAAG AACGGTAAAA CGGTTGTGGT TAAGGTCAAC GACAGGGGGC CTTTCGTGCG GGGCCGAATT ATAGATTTGT CCAAATCCGC ATTTAGCAGC ATAGGCAATA CCTCGGCGGG TTTACTGGAT GTTAAAATTG AAGTGATTCA AGCCGCGAGT CAGTAA
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Protein sequence | MSLKYLSLTL MLLATLALSG CSSTHSGNWQ GFTESGQASF YGDKHQNKKT ASGERYNHKL KTAAHKEIPF GSVVKVTNLK NGKTVVVKVN DRGPFVRGRI IDLSKSAFSS IGNTSAGLLD VKIEVIQAAS Q
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