| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3099 |
|---|
| Symbol | |
|---|
| ID | 4477815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 3718112 |
|---|
| End bp | 3718873 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639727703 |
|---|
| Product | peptidase C26 |
|---|
| Protein accession | YP_870729 |
|---|
| Protein GI | 117921537 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2071] Predicted glutamine amidotransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.015015 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTCG AGTTGCCCCT TATTGGTGTT ATTGCGTGTA ATCAACAATT GGGATCACAT
CCCTTTAATA TTGTTGGTGA AAAATACCTC TTAGGTGTAG TGAATGGTGC TAAGGGCTGG
CCCTTGGTGA TCCCCTCATT AGGTGCTGAA CAACCTATAG AGGCGATTCT GGCAAGTCTC
GATGGCATTC TCTTTACCGG TTCGCCTTCG AATGTTGAAC CCCATCTCTA TGCGGGTGAA
CCGAGTGAAG TCGGTACTCA CCACGATCCC AAACGCGATG CCACCACCTT ACCGCTCATC
CGTGCGGCCA TTGCGGCGGG TGTGCCTGTG CTTGGGATTT GTCGTGGCTT TCAAGAGATG
AACGTGGCGT TTGGTGGCAG TTTGCATCAG AAGTTGCACG AAGTGGGCGG TTTTATTGAA
CACAGAGAAG ATAAAGAGGC CTCGTTAGAG GTGCAATATG GGCCATCCCA CAGTATCACT
GTGGAGCCTG GGGGGGTCAT TTACGAGGCC TGGGGCCGTA ACTCGGCAGA GGTAAACTCT
GTACATACTC AGGGCGTGGA GCGTCTTGGG ATTGGGTTGC GGCCAGAAGC TTATGCTCCA
GATGGTCTAG TGGAGGCCTT CTCCGTTATA GACACAAATG AATTTGCCCT AGGTGTGCAA
TGGCATCCTG AATGGAAGGT GAGTGAAAAC CCATTTTTCC TCTCTATATT CAATGCCTTT
GGTGATGCGT GCCGTCGTAG GGCTACAACT CGAGTGAAAT AA
|
|---|
| Protein sequence | MSVELPLIGV IACNQQLGSH PFNIVGEKYL LGVVNGAKGW PLVIPSLGAE QPIEAILASL
DGILFTGSPS NVEPHLYAGE PSEVGTHHDP KRDATTLPLI RAAIAAGVPV LGICRGFQEM
NVAFGGSLHQ KLHEVGGFIE HREDKEASLE VQYGPSHSIT VEPGGVIYEA WGRNSAEVNS
VHTQGVERLG IGLRPEAYAP DGLVEAFSVI DTNEFALGVQ WHPEWKVSEN PFFLSIFNAF
GDACRRRATT RVK
|
|---|
| |