| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3096 |
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| Symbol | |
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| ID | 4477812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3713741 |
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| End bp | 3714877 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639727700 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_870726 |
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| Protein GI | 117921534 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0831246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGCA CCTCGGGCGT CACCAACAAA CCCACTACAA AGACGCAAGA AAAAGTCCTG
CTTAAGATTG AGCGGGTCAG TAAATTGTTC GACGATGTTC GCGCGGTTGA CGACGTATCA
TTGACGATTA ATAAAGGTGA GATTTTTGCT TTACTTGGGG GCTCTGGCTC GGGTAAGTCG
ACCTTATTGC GTATGCTCGC GGGGTTCGAA AGACCAACCT CTGGGCGGAT TTTTCTCGAC
GGTGAAGATA TTACCGATTT GCCCCCCTAC GAACGTCCCA TCAACATGAT GTTCCAATCC
TATGCGCTCT TCCCCCATAT GACGGTCGCG CAAAATATCG CCTTCGGTTT AAAGCAAGAT
AAGTTACCCA AAGCGGAAAT TGAGCAAAGG GTGCAAGAAA TGCTCAAACT GGTTCATATG
GAGCAATATG GCAAACGTAA GCCGCATCAG CTTTCCGGTG GTCAGCGTCA GCGGGTGGCG
TTAGCTCGCT CCCTCGCAAA ACGTCCTAAG CTATTGCTAC TCGATGAGCC GATGGGCGCA
CTGGATAAAA AGCTGCGCAC TCAGATGCAG TTAGAAGTGG TTGAAATTCT TGAGCGTGTT
GGCGTGACTT GTGTGATGGT GACCCATGAT CAGGAAGAAG CCATGACCAT GGCGGGCCGA
ATTTCGATTA TGAGTGACGG TTGGATTGCC CAAACCGGCT CACCTATGGA CATTTACGAG
AGTCCCAACA GCCGCATGAT TGCCGAATTT ATCGGTTCAG TGAACCTCTT TGGCGGCGAG
ATTGAAGTGG ACGAAGTCGA CCACCTGATC ATTAAACCCA ATGACTTAGC TCAGCCCTTC
TATGTGGGTT ACGGGGTAAC GACCAGTGCC GAAGAAAAGC ATGTGTGGTT AGCGGTACGC
CCCGAAAAAA CCATTATTAG CCGTGAGCAA CCAGAGGGCG AGTACAACTG GGCCAAGGGG
ATAGTGCATG ATATCGCCTA CTTAGGTGGC ATCTCGGTGT ACTACATTCG CCTCGAGAAC
GGCCAAATTG TGCAATGCAG TATGACTAAC CGTGAACGCC GTGCCGACCA TGCGACATGG
GATGATGAAG TGTTCATCAG TTGGGAGGAC ACCAGTGGCG TGGTGTTAAG ATCATGA
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| Protein sequence | MASTSGVTNK PTTKTQEKVL LKIERVSKLF DDVRAVDDVS LTINKGEIFA LLGGSGSGKS
TLLRMLAGFE RPTSGRIFLD GEDITDLPPY ERPINMMFQS YALFPHMTVA QNIAFGLKQD
KLPKAEIEQR VQEMLKLVHM EQYGKRKPHQ LSGGQRQRVA LARSLAKRPK LLLLDEPMGA
LDKKLRTQMQ LEVVEILERV GVTCVMVTHD QEEAMTMAGR ISIMSDGWIA QTGSPMDIYE
SPNSRMIAEF IGSVNLFGGE IEVDEVDHLI IKPNDLAQPF YVGYGVTTSA EEKHVWLAVR
PEKTIISREQ PEGEYNWAKG IVHDIAYLGG ISVYYIRLEN GQIVQCSMTN RERRADHATW
DDEVFISWED TSGVVLRS
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