| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3090 |
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| Symbol | |
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| ID | 4477806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3706474 |
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| End bp | 3707523 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639727694 |
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| Product | luciferase family protein |
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| Protein accession | YP_870720 |
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| Protein GI | 117921528 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00266467 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.324739 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATAT CATCGACTTC AACATCTGCC ACCCCATCGC AGGCAGTGAC TAAATCTCCC
CTAGCGGATA TTCCCTTTTC ACTCTTAGAG CTCGCCCCCG TACGCCAAGG CGCGAGCATC
GGAGACACGC TACGCGCCAG CCTACAATAC GCTAAGGTGG CCGATGACTT AGGTTTTAAT
CGATTCTGGT TTGCCGAGCA CCACAATATG CCCGGTATCG CCAGCGCCGC GACATCGGTG
TTAATTGGCT ATATTGCCGA GAATACTAAA CGCATTCGCG TCGGCGCGGG TGGGATTATG
CTGCCCAACC ATGCGCCCTT AGTGGTTGCC GAGCAGTTTG GTACACTCGA AAGCCTTTAT
CCTGGTCGTA TCGATTTAGG ACTTGGCCGC GCACCGGGCA GCGATCAAAT CACCAGCCGC
GCCCTTAACC GCGATATGAG CCGCGCGGAG CAATTTCCCG CCGAGGTGAG CGAGTTACAA
ACCTTACTCG GCGACTACAA TGGCCGTCAT CCCGTAAGAG CGATTCCCGG CGAAGGCACC
CATGTGCCGA TTTGGCTACT CGGCTCTAGC CTCTTTAGCG CCCAGCTTGC GGCACAGCGC
GGCTTACCCT ATGTCTTTGC AGGGCATTTT GCGCCCAGAT TCCTCTACGA TGCGATAGAG
ATTTACCGCC GCGACTTTAA GCCATCTAAG GTGTTGGATA AGCCCTATGT CATGCTTGGC
CTGCCACTTA TCGCCGCCGA GACAGACGCC GAAGCAGAAT ACTTAAGCAC CACCTCCAAG
CAACGGGTGC TTGCGCTGAT CCGTGGTGAA CCGCTTTGGT TAAAACCGCC CGTAGACAGC
ATGGATGGCC TGTGGAGCGA GCAGGAAAAA ACCTATGTCG ATAACTTCTT AGGCTTATCC
GTCACCGGTG GCCCCACCAG CATCAAACAC CGCTTAGAGA TGATAGTGAA GGAGTTAGGT
GTCGATGAGT TTATCTTTAC CAACGATTTG TATGATCAGG ACAAACGTGA GCGAGCGCTG
CAAATCCTAA TGGAGATAAA AGGCTCTTAA
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| Protein sequence | MAISSTSTSA TPSQAVTKSP LADIPFSLLE LAPVRQGASI GDTLRASLQY AKVADDLGFN
RFWFAEHHNM PGIASAATSV LIGYIAENTK RIRVGAGGIM LPNHAPLVVA EQFGTLESLY
PGRIDLGLGR APGSDQITSR ALNRDMSRAE QFPAEVSELQ TLLGDYNGRH PVRAIPGEGT
HVPIWLLGSS LFSAQLAAQR GLPYVFAGHF APRFLYDAIE IYRRDFKPSK VLDKPYVMLG
LPLIAAETDA EAEYLSTTSK QRVLALIRGE PLWLKPPVDS MDGLWSEQEK TYVDNFLGLS
VTGGPTSIKH RLEMIVKELG VDEFIFTNDL YDQDKRERAL QILMEIKGS
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