Gene Shewana3_3085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3085 
Symbol 
ID4477800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3697182 
End bp3697625 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content48% 
IMG OID639727688 
ProductGatB/Yqey domain-containing protein 
Protein accessionYP_870715 
Protein GI117921523 
COG category[S] Function unknown 
COG ID[COG1610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000446062 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00030049 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCTAA TTGATCAGCT AAAAGACCAT ATGAAACAGG CCATGATCGC CAAAGAGAAG 
GCGAGATTGA GCACTATTCG TATGGCACTT GCAGCCATCA AACAGATTGA AGTGGATACC
CGCGAAACCC TGAATGATGA GCAGGTTATA GCTGTCTTAA CCAAAATGGT GAAACAACGT
CGCGATTCGA TTGCTCAATA TGAAGCAGCG GGTCGTAGCG AGTTGGCCGC AGCAGAAGCA
GAAGAGATTC AAGTTATTGA AACTTTCCTG CCGACTCCCC TCTCTGAGGC GGAAATTGCC
GCGTTCATCG ATGCCGCTAT TGCTGAAATA GGCGCATCCT CCATGGCGGA TATGGGCAAA
GTAATGGGAG CATTAAAACC TAAAGTTCAA GGACGTGCAG ACATGGGCGC TATCGGCGCT
ATGATCCGTG CAAAATTGCA ATAA
 
Protein sequence
MSLIDQLKDH MKQAMIAKEK ARLSTIRMAL AAIKQIEVDT RETLNDEQVI AVLTKMVKQR 
RDSIAQYEAA GRSELAAAEA EEIQVIETFL PTPLSEAEIA AFIDAAIAEI GASSMADMGK
VMGALKPKVQ GRADMGAIGA MIRAKLQ