Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3068 |
Symbol | |
ID | 4477783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3679414 |
End bp | 3680220 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639727671 |
Product | hypothetical protein |
Protein accession | YP_870698 |
Protein GI | 117921506 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.175879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000000207541 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCAAATT ATCATCGTTG GCTAGATCGG CTGCAAGTCA TGGATTTAAA GTATCGTCCA TCGACCAAGT ATTTATTGTC GTTAGTCTTA GTGGCATTTC TATTAGGGGC TTGGGTGAGC TTTATTGTGC TCAACAGTGA CGAGCCCGTC GTAAAGCATA TTGGCGGCGG TAAGCTGCAA CGTGTTACCG CCGAACTTGA GGCACAAACC CAGGAACTCG CGACCCGCAA TTTAGAATTA TCTGTCGAGC GCGAAGCCAA TGCGCAAATG CAAGATATGT TTGCACAGCA GATGAAGAAA CAAAAAGAGC TAGAGCACGA ATTAGCCTTT TATCGCAGTA TTATGTCGCC GGATGACAAT GCCGAAGGGG TGGCCATTCA CGGCTTAGAA ATGACGCCGG GCGCCCTGGC GGATGAGTAT AATTTCAAGT TGATTTTAAC TCAGCTGCAA AAACGTAAGC AGGCGATTCA AGGTCGTACC GAAATCACCC TCATTGGTGT GCAAGACGGA AAATCCGTTG AGTTAAGTGT GAACAAACTC ACGGGTTCTA AGCTCGAGTT TGATTTTCGC TATTTTCAGG TCATAGATAC CAAAGTTACA GTGCCTGCAG GGTTTAATGT GGTGCAGGTC AAAGTCAAAG TGGTGGTGCC TTCGAGCCGC TGGACCAAAA ATTCGCAGAC AGAACATGTC TATAGTGTCC CTGAGTTATT ACAGGGTGAA AAAGAACCGC GGGTAATACT TGAACAAAAT AGTCAGGTAA CGGATAATTT GCCCCAGAAA ACTGATGTAA GAGGTAGTAA TGACTGA
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Protein sequence | MPNYHRWLDR LQVMDLKYRP STKYLLSLVL VAFLLGAWVS FIVLNSDEPV VKHIGGGKLQ RVTAELEAQT QELATRNLEL SVEREANAQM QDMFAQQMKK QKELEHELAF YRSIMSPDDN AEGVAIHGLE MTPGALADEY NFKLILTQLQ KRKQAIQGRT EITLIGVQDG KSVELSVNKL TGSKLEFDFR YFQVIDTKVT VPAGFNVVQV KVKVVVPSSR WTKNSQTEHV YSVPELLQGE KEPRVILEQN SQVTDNLPQK TDVRGSND
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