| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3064 |
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| Symbol | |
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| ID | 4477779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3677237 |
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| End bp | 3677932 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639727667 |
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| Product | aquaporin Z |
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| Protein accession | YP_870694 |
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| Protein GI | 117921502 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.158799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000187933 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAATATGT CACAAAAAAT GGCGGCAGAA TTTTTGGGCA CTCTGTGGCT CGTTCTCGGC
GGCTGCGGCA GCGCAGTGCT GGCGGCAGCC TTTCCGGAAG TTGGGATCGG TTTACTCGGG
GTGGCGTTAG CCTTTGGTTT AACGGTTCTG ACCATGGCAT TCGCCATTGG CCATATTTCG
GGCTGCCACT TAAACCCCGC CGTATCCTTT GGGCTCTGGG CTGGCGGACG TTTTCCAGCC
TCGGAACTGC TGCCTTATAT CATTGCCCAA GTGGCGGGTG GTATTGTCGG CGCGGGTGTA
TTGTACGCCA TCGCCTCAGG GCAAGAAGGT TTTAGTCTTG CGGCAGGCTT TGCTTCTAAC
GGCTTTGGCG AACATTCCCC CGGCGGTTAC AGCATGATGT CGGTGCTAAT CTGCGAAATC
GTGATGACCT TGTTCTTCTT ATTGGTGATT TTAGGTGCGA CCGACGAGCG CGCACCTAAA
GGCTTTGCGC CGATTGCGAT TGGTCTGTGT TTAACCCTTA TACACTTGAT CAGCATTCCC
GTGTCAAACA CCTCGGTCAA TCCGGCTCGC AGTACCGGCC CAGCGCTGTT TGTTGGCGAT
TGGGCTGTAT CACAACTGTG GATATTCTGG GTCGCTCCTA TCGTAGGTGC GATTCTCGCC
GGTATGATTT ACCGTTATTT CAAGGCTGCT GAGTAA
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| Protein sequence | MNMSQKMAAE FLGTLWLVLG GCGSAVLAAA FPEVGIGLLG VALAFGLTVL TMAFAIGHIS
GCHLNPAVSF GLWAGGRFPA SELLPYIIAQ VAGGIVGAGV LYAIASGQEG FSLAAGFASN
GFGEHSPGGY SMMSVLICEI VMTLFFLLVI LGATDERAPK GFAPIAIGLC LTLIHLISIP
VSNTSVNPAR STGPALFVGD WAVSQLWIFW VAPIVGAILA GMIYRYFKAA E
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