| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3051 |
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| Symbol | gltD |
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| ID | 4478314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3658672 |
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| End bp | 3660078 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639727654 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_870681 |
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| Protein GI | 117921489 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0368167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAACG ATTTTCAATT TATTGAAGTG GGTCGCAAAG ACCCAACTAA ACACCCTGCA
GCAAAGCGTT CGACTCAGTT TATTGAGATT TATCAGCCCT TTGCTCAAGC TCAGGTGACT
GAACAGGCGG ACCGTTGTCT CGATTGCGGT AACCCTTATT GTGAGTGGAA ATGCCCGCTG
CACAACTATA TTCCCAACTG GCTGAAACTG GCGCAGCAGG GGCGAATTAT GGAAGCGGCG
GATTTGGTCC ATGAGACTAA TACCCTGCCC GAGATCTGCG GCCGCGTCTG CCCACAGGAC
AGACTCTGTG AAGGTGCTTG TACCCTAAAC GCCGACTTTG GTGCCGTGAC TATCGGTAAT
GTGGAGAAGT ACATTACCGA TACCGCCATC GCCCAAGGCT GGCGTCCTGA TATGAGCAAG
GTCACGCCAC GCAAGGAAAA GGTCGCGATT GTGGGCGCTG GCCCTGCTGG TTTAGGCTGT
GCCGATATTC TTGCCCGTAA TGGGATTAAG GCTGTGGTGT TTGATAAGTA TCCCCAGATT
GGTGGCCTGC TGACCTACGG TATTCCGGCT TTTAAACTGG ATAAAGCCGT GATGGCGACT
CGCCGCACTG TGTTAGAAGG CATGGGCATC GAGTTCAAGC TGGGCGTCAC TGTCGGTAAA
GACGTCGCCT TTAACCAACT GCTAGAGGAA TACGATGCAG TCTTCCTCGG CATGGGAACC
TACACCGCCA TGAAAGCGGG CCTTGAGGGC GAAGATGCCC AAGGCGTGTA CCAAGCCCTG
CCCTACTTGA TTGGCAATAC CCATCACCTG ATGGGCAGCA GTAATCCTGA CACCCCTTAC
CTGAATCTTG CCGGTAAGCG CGTGGTGGTC TTAGGTGGCG GTGATACCGC CATGGACTGT
GTCCGCACCG CCGTGCGCCA AGGGGCCAGC AGTGTAATTT GTGCCTATCG CCGTGACGAA
GCCAACATGC CTGGTTCACG CCGCGAGGTG CAAAACGCCC GTGAAGAGGG CGTGAACTTC
CTGTTTAACC GTCAACCCGT GGCGATTAAA ACCCAGGATG GCAAAGTAGT GGGCGTGGAA
TGCGTTGAAA CCCAAATGGG TAAAGCCGAT GCCAGCGGCC GTCAACGTGC CGAAGCGATT
GAAGGCAGCG AGCAGTTACT CGACGCCGAT GCGGTGATTA TCGCCTTCGG TTTCCAACCT
AGCCCTGCGC CTTGGTTTGC CGATTACGGC ATTGAACTAG ACCAATGGGG CCGAGTAAAA
GCCAGTAAAC AGGCCGATAA CCCATTCCAA ACCACCAATC CAAAGGTATT TGCTGGCGGT
GATATGGTCC GAGGTTCGGA TCTGGTTGTG ACCGCGATTG CCGAAGGACG TGATGCCGCA
CAAGGTATTC TTAACTACTT AGATTAA
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| Protein sequence | MSNDFQFIEV GRKDPTKHPA AKRSTQFIEI YQPFAQAQVT EQADRCLDCG NPYCEWKCPL
HNYIPNWLKL AQQGRIMEAA DLVHETNTLP EICGRVCPQD RLCEGACTLN ADFGAVTIGN
VEKYITDTAI AQGWRPDMSK VTPRKEKVAI VGAGPAGLGC ADILARNGIK AVVFDKYPQI
GGLLTYGIPA FKLDKAVMAT RRTVLEGMGI EFKLGVTVGK DVAFNQLLEE YDAVFLGMGT
YTAMKAGLEG EDAQGVYQAL PYLIGNTHHL MGSSNPDTPY LNLAGKRVVV LGGGDTAMDC
VRTAVRQGAS SVICAYRRDE ANMPGSRREV QNAREEGVNF LFNRQPVAIK TQDGKVVGVE
CVETQMGKAD ASGRQRAEAI EGSEQLLDAD AVIIAFGFQP SPAPWFADYG IELDQWGRVK
ASKQADNPFQ TTNPKVFAGG DMVRGSDLVV TAIAEGRDAA QGILNYLD
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