Gene Shewana3_3045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3045 
Symbol 
ID4478308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3649984 
End bp3650991 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content47% 
IMG OID639727649 
Productadenylate cyclase-related protein 
Protein accessionYP_870676 
Protein GI117921484 
COG category[T] Signal transduction mechanisms 
COG ID[COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000460708 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.431544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCGT TCGTGTTTTT CCGATATGCA CAGTCGCCGG AGTTACCACA ATGGGCTGTC 
GGTTCGGCCG ATCTCGCGAC GCTTGCCGTC TACATGGGCA TCATTTTTGG CAGCCTACAT
TGGATGTCAA ACCTGATCGC CGACTTCAGC GCCATCAATC GTCTTCCCTA TGTATTCTCA
GTGATTTTTA AAGGTTTGTT CCTGCTACTC GGGGCGACCA CCTTAGCCTA TATGACCCAG
TTCTTGAATA TGTGGGCCAT TGAAAATCAT ATGTCGACCC TAAGACAAAT GCTCACGGCG
CATATTCTCT ATAGTCCATC CTTCCAAGCG CTCATTGTCT ATTTAGTGGT TGTACGGGTC
AGCTTAGCCT TTGTCGAACA AATGGCACTC TTGGTTGGGC CGCGTATTCT GCTCAATATT
GGTTTAGGTA AATACCATAA ACCACGATAC GAGCAGCGTT TATTCCTTTA TTTAGATATG
GTTGCCTCGA CAACCCACGC CGAATCCCTC GGGGATTACC GTTTTAGCCG TCTGATTCAA
GACAGCTTTA GCCTGCTATC CGATACTGTG ACCAATAACG AAGCCGAAAT TTACCGTTAT
ATGGGTGATG CCGTATTGAT CCACTGGCCG TTAGAAGAAG GCGTAGTGCA CGACCGCTGC
ATGAATATCT ATTTTGAATT TAGCCAGCAG TTAAATTGGC AGCGACGTTA CTTTGAAGAG
CACTATGGCT TTGTGCCCAA ATTTAAGGCG GCAGCGCACT GTGGACAAGT GGTCGCTGCT
GTGGTTGGTG TGCAAAAACA AGAAATTAGC TTCTTTAGTG ATGTGCTAAA TACCTTAGCC
AGACTTCAAG ATCAGTGTAA TCCACTGGGG CAACGCATGC TGATCTCTGG TGCGCTGGCG
GGCCGACTCG ACAATCCCAA TAGCGAATAC CGCTTAACCA ATTTGGGTCC AGTCAAATTA
AAGGGGAAAC AACACTCGAT TGAAGTGTTT GGTGTTTCCC CTCTCTAA
 
Protein sequence
MAAFVFFRYA QSPELPQWAV GSADLATLAV YMGIIFGSLH WMSNLIADFS AINRLPYVFS 
VIFKGLFLLL GATTLAYMTQ FLNMWAIENH MSTLRQMLTA HILYSPSFQA LIVYLVVVRV
SLAFVEQMAL LVGPRILLNI GLGKYHKPRY EQRLFLYLDM VASTTHAESL GDYRFSRLIQ
DSFSLLSDTV TNNEAEIYRY MGDAVLIHWP LEEGVVHDRC MNIYFEFSQQ LNWQRRYFEE
HYGFVPKFKA AAHCGQVVAA VVGVQKQEIS FFSDVLNTLA RLQDQCNPLG QRMLISGALA
GRLDNPNSEY RLTNLGPVKL KGKQHSIEVF GVSPL