| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3030 |
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| Symbol | |
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| ID | 4478573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3635650 |
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| End bp | 3636582 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639727634 |
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| Product | sigma E regulatory protein, MucB/RseB |
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| Protein accession | YP_870661 |
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| Protein GI | 117921469 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3026] Negative regulator of sigma E activity |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0170081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGTCTAA TCCTGTTGGC TTTGTTAGCC TTGGTATTCC CTGCAGTGGC GCAGGAAGAT
ATGCCTGCCA AAGTCTGGCT TGAGAAAATG AGCCAGGCTT TAAAAGAGAA AGAGTTCAAA
GCATCGATTA TACAACTTCA GGCCGACCAT ATTCGGCCTT TGGTTTATCT TCACGGTAAG
GTGAATAATC AAGAAGTTGC GTTTCTTGAG TACCTCAATG GCCCGCCAAA AAATGCGGTC
AGAGTGGGCA ATAGAGTCAC CTTTATTGAA CACGATCAAC CCGCCTATAG CATCCTTTCT
AATCATATTC AGGGCGTGTG GCCTGCGGCT TTCTCGTCAA AGATGAGTGA CTTAGAAGTG
GGGTATCAGT TTGTGCTCGG TGGTCGTACG CGTATTGCGG GACGTCCAGG TCAAATGATC
CGTTTACTGC CAAATGATGA GTACCGTTAC GGTTTCCAAA TTTGGCTGGA TATGGACACT
TATCTGCCGC TGAGATACGA CATGCTAACT CAAGATAAAC AATTACTTGA ACAGCTGATG
GTGATTGAGC TGATTGAGTT AAATGAGCCG CCATCGATTC TGCAGGAAGC CTATAAACAA
GAATGGCCAG CGGTTATCGA TCAGGCCGAA CGCCAAGATG GACAAAACTG GCAGTTCTCT
TGGTTACCAG CAGGATTTAG TGTGGTAGTG CGTGACCATC ACCGTTTAAT TGGCAGTCAC
GAGGCGGTTG AATATATTGC CTTAACCGAT GGCTTAGCCA GCATTTCTGT CTATGTCGCG
CGAGCTGGCT CGACGCCATT ACCTGAAGAG TTAATCACTC GTAATGGCTT GTCTTTGGTG
TCTGAAAAAG TGGGTAATGC CGAAGTAGTT GCCGTGGGTA AAGTGCCTAC CGAAACCTTG
GCCCGTATCG CGAAAAGTCT GATGTTAGAA TAA
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| Protein sequence | MRLILLALLA LVFPAVAQED MPAKVWLEKM SQALKEKEFK ASIIQLQADH IRPLVYLHGK
VNNQEVAFLE YLNGPPKNAV RVGNRVTFIE HDQPAYSILS NHIQGVWPAA FSSKMSDLEV
GYQFVLGGRT RIAGRPGQMI RLLPNDEYRY GFQIWLDMDT YLPLRYDMLT QDKQLLEQLM
VIELIELNEP PSILQEAYKQ EWPAVIDQAE RQDGQNWQFS WLPAGFSVVV RDHHRLIGSH
EAVEYIALTD GLASISVYVA RAGSTPLPEE LITRNGLSLV SEKVGNAEVV AVGKVPTETL
ARIAKSLMLE
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