Gene Shewana3_3028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3028 
Symbol 
ID4478571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3633207 
End bp3634997 
Gene Length1791 bp 
Protein Length596 aa 
Translation table11 
GC content48% 
IMG OID639727632 
ProductGTP-binding protein LepA 
Protein accessionYP_870659 
Protein GI117921467 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0481] Membrane GTPase LepA 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000110121 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACA TTAGAAACTT CTCAATTATT GCCCATATCG ACCATGGTAA ATCGACGCTA 
TCAGATCGTC TTATTCAGGT TTGTGGCGGG TTAAGCGACC GTGAAATGGA TGCGCAAGTT
CTTGATTCTA TGGATCTAGA GCGTGAGCGC GGTATCACGA TTAAGGCCCA GAGCGTCACG
TTGGAATACA AAGCCAAAAA TGGCGAGACT TACCAACTTA ACTTTATTGA TACTCCAGGC
CACGTTGACT TTTCCTATGA AGTATCTCGT TCATTAGCCG CCTGTGAGGG TGCGCTGCTC
GTGGTGGATG CGGGTCAAGG TGTTGAAGCC CAGACGCTTG CAAACTGTTA CACCGCGCTG
GATATGAATC TGGACGTAGT ACCTATCCTG AACAAAATCG ACTTACCCCA AGCCGATCCT
GAGCGCGTAG CCGCTGAGAT TGAAGACATC GTGGGTATCG ATGCGATGAA CGCTGTGCGT
TGCTCGGCCA AAACCGGTGT AGGTATTGAC GAGGTATTAG AAGTCATCGT CGATCAAATT
CCACCGCCAG AAGGCGACCC AGAGGCGCCG CTACAAGCGT TGATCATCGA CTCTTGGTTT
GACAGCTACT TAGGCGTTGT TTCTCTCGTA CGTATTAAAA ATGGCGTGCT GAAAAAAGGC
GACAAGTTTA AGGTAATGTC TACCGGACAA AACCACACCG CAGATCGCGT GGGTATTTTC
ACGCCTAAAC AAACCGATAA AACCGAGCTG AAAACCGGTG AAGTAGGTTT CGTTATCGCG
GGTATTAAAG AGATTCATGG TGCACCAGTG GGTGATACCT TGACGCTGGC TAAGCATGGT
GCTGAAAAGC CATTACCCGG CTTTAAGAAA GTGAAGCCTC AGGTATACGC GGGTGTGTTC
CCGATTTCGA CCGATGAATA TGAAAACTTC CGCGATGCGC TGAACAAACT CAGCCTCAAC
GATGCGTCAT TGTTCTTCGA GCCTGAAAGT TCATCAGCCC TAGGTTTTGG TTTCCGTATT
GGCTATTTAG GCCTGCTCCA CATGGAAATC ATTCAAGAGC GTTTAGAGCG TGAATACGAT
CTTGACCTTA TCACGACGGC GCCTACCGTA GTGTATGAGG TGCTGTTGAC CAGTGGTGAA
ACCATCTATG TTGATAACCC AGCGGACTTG CCGGCGATTA ACAACATCGA AGAGATGCGT
GAGCCAATCG TTGAAGCTAA CATTCTTGTG CCAAAAGAAT ACTTAGGTAA CGTGATTACC
CTGTGTATCG AAAAACGCGG TACCCAAGTG AACATGGTTT ACCACGGCAA CCAAGTGGCC
GTGACTTACC ATCTGCCGAT GGCAGAAGTG GTAATGGACT TCTTCGACCG CTTAAAATCA
ACCAGCCGTG GTTATGCATC GTTAGAATAC AACTTCATCC GCTTCGATCC TGCGGACATG
GTGCGCTTAG ATATCTTAAT CAACGGCGAC CGCGTAGACG CATTGGCGAT GATTATTCAC
CGTTCAAACA TTCGTCACCG TGGTTTGGCG TTGGTTGAGA AGATGAAAGA GCTTATCCCT
CGTCAGATGT TTGATATTGC GATTCAAGCC GCTGTTGGCA GCCAAATTAT TGCCCGTTCT
ACCGTAAAAG CCTTACGTAA AGACGTAACG GCTAAGTGTT ACGGTGGTGA CGTTTCCCGT
AAGAAGAAAC TCTTGAATAA ACAAAAAGAG GGTAAGAAAC GGATGAAACA AGTGGGTAAC
GTTGAGGTGC CGCAAGAGGC GTTCTTAGCG GTACTTAAGC TAAACGAGTA A
 
Protein sequence
MKHIRNFSII AHIDHGKSTL SDRLIQVCGG LSDREMDAQV LDSMDLERER GITIKAQSVT 
LEYKAKNGET YQLNFIDTPG HVDFSYEVSR SLAACEGALL VVDAGQGVEA QTLANCYTAL
DMNLDVVPIL NKIDLPQADP ERVAAEIEDI VGIDAMNAVR CSAKTGVGID EVLEVIVDQI
PPPEGDPEAP LQALIIDSWF DSYLGVVSLV RIKNGVLKKG DKFKVMSTGQ NHTADRVGIF
TPKQTDKTEL KTGEVGFVIA GIKEIHGAPV GDTLTLAKHG AEKPLPGFKK VKPQVYAGVF
PISTDEYENF RDALNKLSLN DASLFFEPES SSALGFGFRI GYLGLLHMEI IQERLEREYD
LDLITTAPTV VYEVLLTSGE TIYVDNPADL PAINNIEEMR EPIVEANILV PKEYLGNVIT
LCIEKRGTQV NMVYHGNQVA VTYHLPMAEV VMDFFDRLKS TSRGYASLEY NFIRFDPADM
VRLDILINGD RVDALAMIIH RSNIRHRGLA LVEKMKELIP RQMFDIAIQA AVGSQIIARS
TVKALRKDVT AKCYGGDVSR KKKLLNKQKE GKKRMKQVGN VEVPQEAFLA VLKLNE