Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3028 |
Symbol | |
ID | 4478571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3633207 |
End bp | 3634997 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639727632 |
Product | GTP-binding protein LepA |
Protein accession | YP_870659 |
Protein GI | 117921467 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0481] Membrane GTPase LepA |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01393] GTP-binding protein LepA |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000110121 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACA TTAGAAACTT CTCAATTATT GCCCATATCG ACCATGGTAA ATCGACGCTA TCAGATCGTC TTATTCAGGT TTGTGGCGGG TTAAGCGACC GTGAAATGGA TGCGCAAGTT CTTGATTCTA TGGATCTAGA GCGTGAGCGC GGTATCACGA TTAAGGCCCA GAGCGTCACG TTGGAATACA AAGCCAAAAA TGGCGAGACT TACCAACTTA ACTTTATTGA TACTCCAGGC CACGTTGACT TTTCCTATGA AGTATCTCGT TCATTAGCCG CCTGTGAGGG TGCGCTGCTC GTGGTGGATG CGGGTCAAGG TGTTGAAGCC CAGACGCTTG CAAACTGTTA CACCGCGCTG GATATGAATC TGGACGTAGT ACCTATCCTG AACAAAATCG ACTTACCCCA AGCCGATCCT GAGCGCGTAG CCGCTGAGAT TGAAGACATC GTGGGTATCG ATGCGATGAA CGCTGTGCGT TGCTCGGCCA AAACCGGTGT AGGTATTGAC GAGGTATTAG AAGTCATCGT CGATCAAATT CCACCGCCAG AAGGCGACCC AGAGGCGCCG CTACAAGCGT TGATCATCGA CTCTTGGTTT GACAGCTACT TAGGCGTTGT TTCTCTCGTA CGTATTAAAA ATGGCGTGCT GAAAAAAGGC GACAAGTTTA AGGTAATGTC TACCGGACAA AACCACACCG CAGATCGCGT GGGTATTTTC ACGCCTAAAC AAACCGATAA AACCGAGCTG AAAACCGGTG AAGTAGGTTT CGTTATCGCG GGTATTAAAG AGATTCATGG TGCACCAGTG GGTGATACCT TGACGCTGGC TAAGCATGGT GCTGAAAAGC CATTACCCGG CTTTAAGAAA GTGAAGCCTC AGGTATACGC GGGTGTGTTC CCGATTTCGA CCGATGAATA TGAAAACTTC CGCGATGCGC TGAACAAACT CAGCCTCAAC GATGCGTCAT TGTTCTTCGA GCCTGAAAGT TCATCAGCCC TAGGTTTTGG TTTCCGTATT GGCTATTTAG GCCTGCTCCA CATGGAAATC ATTCAAGAGC GTTTAGAGCG TGAATACGAT CTTGACCTTA TCACGACGGC GCCTACCGTA GTGTATGAGG TGCTGTTGAC CAGTGGTGAA ACCATCTATG TTGATAACCC AGCGGACTTG CCGGCGATTA ACAACATCGA AGAGATGCGT GAGCCAATCG TTGAAGCTAA CATTCTTGTG CCAAAAGAAT ACTTAGGTAA CGTGATTACC CTGTGTATCG AAAAACGCGG TACCCAAGTG AACATGGTTT ACCACGGCAA CCAAGTGGCC GTGACTTACC ATCTGCCGAT GGCAGAAGTG GTAATGGACT TCTTCGACCG CTTAAAATCA ACCAGCCGTG GTTATGCATC GTTAGAATAC AACTTCATCC GCTTCGATCC TGCGGACATG GTGCGCTTAG ATATCTTAAT CAACGGCGAC CGCGTAGACG CATTGGCGAT GATTATTCAC CGTTCAAACA TTCGTCACCG TGGTTTGGCG TTGGTTGAGA AGATGAAAGA GCTTATCCCT CGTCAGATGT TTGATATTGC GATTCAAGCC GCTGTTGGCA GCCAAATTAT TGCCCGTTCT ACCGTAAAAG CCTTACGTAA AGACGTAACG GCTAAGTGTT ACGGTGGTGA CGTTTCCCGT AAGAAGAAAC TCTTGAATAA ACAAAAAGAG GGTAAGAAAC GGATGAAACA AGTGGGTAAC GTTGAGGTGC CGCAAGAGGC GTTCTTAGCG GTACTTAAGC TAAACGAGTA A
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Protein sequence | MKHIRNFSII AHIDHGKSTL SDRLIQVCGG LSDREMDAQV LDSMDLERER GITIKAQSVT LEYKAKNGET YQLNFIDTPG HVDFSYEVSR SLAACEGALL VVDAGQGVEA QTLANCYTAL DMNLDVVPIL NKIDLPQADP ERVAAEIEDI VGIDAMNAVR CSAKTGVGID EVLEVIVDQI PPPEGDPEAP LQALIIDSWF DSYLGVVSLV RIKNGVLKKG DKFKVMSTGQ NHTADRVGIF TPKQTDKTEL KTGEVGFVIA GIKEIHGAPV GDTLTLAKHG AEKPLPGFKK VKPQVYAGVF PISTDEYENF RDALNKLSLN DASLFFEPES SSALGFGFRI GYLGLLHMEI IQERLEREYD LDLITTAPTV VYEVLLTSGE TIYVDNPADL PAINNIEEMR EPIVEANILV PKEYLGNVIT LCIEKRGTQV NMVYHGNQVA VTYHLPMAEV VMDFFDRLKS TSRGYASLEY NFIRFDPADM VRLDILINGD RVDALAMIIH RSNIRHRGLA LVEKMKELIP RQMFDIAIQA AVGSQIIARS TVKALRKDVT AKCYGGDVSR KKKLLNKQKE GKKRMKQVGN VEVPQEAFLA VLKLNE
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