Gene Shewana3_3021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3021 
Symbol 
ID4478564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3627744 
End bp3628280 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content43% 
IMG OID639727625 
Producthypothetical protein 
Protein accessionYP_870652 
Protein GI117921460 
COG category[S] Function unknown 
COG ID[COG4539] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0267108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCG CCGTAGAGCA GCTATCAACC TATAAGAGTG TGCATTTAAA TCAGCGCAAT 
ATACTAACCC ATTTCGTTGG TATCCCATTG ATTATATGGT CTGCTTTCCT ATTACTAGCG
ACTATCCGTA TTCCACTTGG CAGCGCGAGT GATGTGAGTT TAGGTGTGAT TTTAGGGGCT
GGTGTGCTGG TTTATTACTT TCGCTTACAT GCAAAGTTAG CGATTGGCCT AGCTTTATTT
ATCGCCCCCG TCGTATATAC GACTGAGCTA ATGGCTGATT CTCCCAACGC CTTCTGGTTG
TTTATATCGG TATTTATCGT GGGATGGATT TTCCAGCTAA TTGGCCATCA ATACGAGAAG
GCCAAACCCG CTTTTGTGGA CGATTTAAAC CAACTGCTAA TTGGCCCATT TTTCTTAATG
GCCGAAGTGT ATTTTATCTT GGGGTTAGAA AAGGAGTTAG ATGCCGAGAT TACACCTATC
GCTATCGAAA AGCGCCGAGT ACTCGAAGCA CGTCTAAAGA CGCAAAGCGT TAAATAA
 
Protein sequence
MKSAVEQLST YKSVHLNQRN ILTHFVGIPL IIWSAFLLLA TIRIPLGSAS DVSLGVILGA 
GVLVYYFRLH AKLAIGLALF IAPVVYTTEL MADSPNAFWL FISVFIVGWI FQLIGHQYEK
AKPAFVDDLN QLLIGPFFLM AEVYFILGLE KELDAEITPI AIEKRRVLEA RLKTQSVK