Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3021 |
Symbol | |
ID | 4478564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3627744 |
End bp | 3628280 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639727625 |
Product | hypothetical protein |
Protein accession | YP_870652 |
Protein GI | 117921460 |
COG category | [S] Function unknown |
COG ID | [COG4539] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0267108 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCCG CCGTAGAGCA GCTATCAACC TATAAGAGTG TGCATTTAAA TCAGCGCAAT ATACTAACCC ATTTCGTTGG TATCCCATTG ATTATATGGT CTGCTTTCCT ATTACTAGCG ACTATCCGTA TTCCACTTGG CAGCGCGAGT GATGTGAGTT TAGGTGTGAT TTTAGGGGCT GGTGTGCTGG TTTATTACTT TCGCTTACAT GCAAAGTTAG CGATTGGCCT AGCTTTATTT ATCGCCCCCG TCGTATATAC GACTGAGCTA ATGGCTGATT CTCCCAACGC CTTCTGGTTG TTTATATCGG TATTTATCGT GGGATGGATT TTCCAGCTAA TTGGCCATCA ATACGAGAAG GCCAAACCCG CTTTTGTGGA CGATTTAAAC CAACTGCTAA TTGGCCCATT TTTCTTAATG GCCGAAGTGT ATTTTATCTT GGGGTTAGAA AAGGAGTTAG ATGCCGAGAT TACACCTATC GCTATCGAAA AGCGCCGAGT ACTCGAAGCA CGTCTAAAGA CGCAAAGCGT TAAATAA
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Protein sequence | MKSAVEQLST YKSVHLNQRN ILTHFVGIPL IIWSAFLLLA TIRIPLGSAS DVSLGVILGA GVLVYYFRLH AKLAIGLALF IAPVVYTTEL MADSPNAFWL FISVFIVGWI FQLIGHQYEK AKPAFVDDLN QLLIGPFFLM AEVYFILGLE KELDAEITPI AIEKRRVLEA RLKTQSVK
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