Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3020 |
Symbol | |
ID | 4478563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3626407 |
End bp | 3627678 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639727624 |
Product | hypothetical protein |
Protein accession | YP_870651 |
Protein GI | 117921459 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4536] Putative Mg2+ and Co2+ transporter CorB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000521324 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACGCTA TATCGACAAG CGCACTCCTC ATTTTCTTAC TAGTGCTTAT CCTTTGTTCT GCCTACTTTT CAGGTTCTGA AACCGCCATG ATGACCCTTA ACCGCTATCG GTTAAGGCAT CTCGCCTCAA ACGGCCATAA AGGTGCGATA CGCGCCCTCA AGTTACTCGA ACGTCCTGAC CGCTTAATTG GCTTGATTCT GATAGGTAAT AACCTCGTTA ATATTCTCGC CTCCGCCATA GCGACCATTA TTGGAATGCG CCTTTGGGGC GATTTAGGCG TCGCGGTCGC CACAGGTGTG CTGACCTTAG TCGTATTAGT CTTTGCCGAA GTCACCCCCA AAACTATCGC CGCCTTGAAC CCTGAACGCA TTGCCTTCCC ATCGAGTATT TTACTCATTG GTCTATCAAC GATTTTTGCC TATGTCGTCA CCAGCGTGAA CTGGATAACC ACAGGCATAC TGCGCCTCTT TGGCATCAAG ACCATCAGCA GTAGCGATGC ACTGAGCCAA GAAGAGTTAA GGACGGTTGT ACATGAGGCT GGCGCCTTGA TCCCCCAACG CCACCAGGAA ATGCTGTTAT CGATTCTCGA TTTAGAAAAA GTGACCGTTG AAGACATCAT GGTGCCGCGC TCGGATATCT ACGCGATTAA CGTCAACGAT GACTTTAAAT TTATCAATCG CCAAGTGATC CAAAGCCCAC ATACTCGAGT GTTGGTATAC CGCGATACCA TTGACGATGC CGTCGGCTTT ATTCATCTGC GTGACGCACT GCGCCTGCAA TCAAAGGAGC AGTTCAGTAA ATCCTCATTG CTACGTGCGG TAAAAGAACT CTACTTTATT CCCGAAGGAA CACCGCTCAA TGTGCAATTA GCCAACTTTC AGCACAATAA AGAGCGCATC GGCCTAGTGG TCGATGAATA TGGTGATATT CAAGGATTGG TGACACTCGA AGATATTCTC GAAGAAATTG TCGGCGACTT CACTACCTCT ATGTTGGCCA CACCGAGTGA AGATATTACT GCCCAGCAGG ATGGAAGCTA CTTAGTCGAT GCCAGTATCA CTATCCGTGA TTTGAATAAA GAAATGAAAT GGGATTTCCC AACCGATGGC CCTAAAACCC TCAATGGCTT GATCTTAGAG TATTTAGAGG ATATCCCCGC CGAGAACACT AGCCTTCGCC TAGCGGGTTA CCCATTAGAA GTGATTGAAG TCGCGGATAA TATGGTCAAA ACAGTACGCA TCATTCCGCA GCATTATCAG TCGCCACGCT AA
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Protein sequence | MDAISTSALL IFLLVLILCS AYFSGSETAM MTLNRYRLRH LASNGHKGAI RALKLLERPD RLIGLILIGN NLVNILASAI ATIIGMRLWG DLGVAVATGV LTLVVLVFAE VTPKTIAALN PERIAFPSSI LLIGLSTIFA YVVTSVNWIT TGILRLFGIK TISSSDALSQ EELRTVVHEA GALIPQRHQE MLLSILDLEK VTVEDIMVPR SDIYAINVND DFKFINRQVI QSPHTRVLVY RDTIDDAVGF IHLRDALRLQ SKEQFSKSSL LRAVKELYFI PEGTPLNVQL ANFQHNKERI GLVVDEYGDI QGLVTLEDIL EEIVGDFTTS MLATPSEDIT AQQDGSYLVD ASITIRDLNK EMKWDFPTDG PKTLNGLILE YLEDIPAENT SLRLAGYPLE VIEVADNMVK TVRIIPQHYQ SPR
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