Gene Shewana3_3020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3020 
Symbol 
ID4478563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3626407 
End bp3627678 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content48% 
IMG OID639727624 
Producthypothetical protein 
Protein accessionYP_870651 
Protein GI117921459 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4536] Putative Mg2+ and Co2+ transporter CorB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000521324 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGCTA TATCGACAAG CGCACTCCTC ATTTTCTTAC TAGTGCTTAT CCTTTGTTCT 
GCCTACTTTT CAGGTTCTGA AACCGCCATG ATGACCCTTA ACCGCTATCG GTTAAGGCAT
CTCGCCTCAA ACGGCCATAA AGGTGCGATA CGCGCCCTCA AGTTACTCGA ACGTCCTGAC
CGCTTAATTG GCTTGATTCT GATAGGTAAT AACCTCGTTA ATATTCTCGC CTCCGCCATA
GCGACCATTA TTGGAATGCG CCTTTGGGGC GATTTAGGCG TCGCGGTCGC CACAGGTGTG
CTGACCTTAG TCGTATTAGT CTTTGCCGAA GTCACCCCCA AAACTATCGC CGCCTTGAAC
CCTGAACGCA TTGCCTTCCC ATCGAGTATT TTACTCATTG GTCTATCAAC GATTTTTGCC
TATGTCGTCA CCAGCGTGAA CTGGATAACC ACAGGCATAC TGCGCCTCTT TGGCATCAAG
ACCATCAGCA GTAGCGATGC ACTGAGCCAA GAAGAGTTAA GGACGGTTGT ACATGAGGCT
GGCGCCTTGA TCCCCCAACG CCACCAGGAA ATGCTGTTAT CGATTCTCGA TTTAGAAAAA
GTGACCGTTG AAGACATCAT GGTGCCGCGC TCGGATATCT ACGCGATTAA CGTCAACGAT
GACTTTAAAT TTATCAATCG CCAAGTGATC CAAAGCCCAC ATACTCGAGT GTTGGTATAC
CGCGATACCA TTGACGATGC CGTCGGCTTT ATTCATCTGC GTGACGCACT GCGCCTGCAA
TCAAAGGAGC AGTTCAGTAA ATCCTCATTG CTACGTGCGG TAAAAGAACT CTACTTTATT
CCCGAAGGAA CACCGCTCAA TGTGCAATTA GCCAACTTTC AGCACAATAA AGAGCGCATC
GGCCTAGTGG TCGATGAATA TGGTGATATT CAAGGATTGG TGACACTCGA AGATATTCTC
GAAGAAATTG TCGGCGACTT CACTACCTCT ATGTTGGCCA CACCGAGTGA AGATATTACT
GCCCAGCAGG ATGGAAGCTA CTTAGTCGAT GCCAGTATCA CTATCCGTGA TTTGAATAAA
GAAATGAAAT GGGATTTCCC AACCGATGGC CCTAAAACCC TCAATGGCTT GATCTTAGAG
TATTTAGAGG ATATCCCCGC CGAGAACACT AGCCTTCGCC TAGCGGGTTA CCCATTAGAA
GTGATTGAAG TCGCGGATAA TATGGTCAAA ACAGTACGCA TCATTCCGCA GCATTATCAG
TCGCCACGCT AA
 
Protein sequence
MDAISTSALL IFLLVLILCS AYFSGSETAM MTLNRYRLRH LASNGHKGAI RALKLLERPD 
RLIGLILIGN NLVNILASAI ATIIGMRLWG DLGVAVATGV LTLVVLVFAE VTPKTIAALN
PERIAFPSSI LLIGLSTIFA YVVTSVNWIT TGILRLFGIK TISSSDALSQ EELRTVVHEA
GALIPQRHQE MLLSILDLEK VTVEDIMVPR SDIYAINVND DFKFINRQVI QSPHTRVLVY
RDTIDDAVGF IHLRDALRLQ SKEQFSKSSL LRAVKELYFI PEGTPLNVQL ANFQHNKERI
GLVVDEYGDI QGLVTLEDIL EEIVGDFTTS MLATPSEDIT AQQDGSYLVD ASITIRDLNK
EMKWDFPTDG PKTLNGLILE YLEDIPAENT SLRLAGYPLE VIEVADNMVK TVRIIPQHYQ
SPR