| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3018 |
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| Symbol | |
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| ID | 4478561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3623855 |
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| End bp | 3625228 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639727622 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_870649 |
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| Protein GI | 117921457 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000039159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGAGA ATCTAACCGA CAGACTGTCA CGCACGCTGA AAAATATCAG TGGCCGTGGT
CGCTTAACCG AAGAAAACGT TAAGGAAACC CTGCGCGAAG TGCGTATGGC GCTGCTGGAG
GCCGATGTTG CCCTGCCTGT GGTGCGTGAA TTCGTTAACA ATGTAAAAGA ACGTGCCGTT
GGTCAGGAAG TGGCGAAGAG CTTAAGTCCT GGTCAAGCCT TTATTAAGAT TGTTCAAAGT
GAACTTGAAA AATCCATGGG TGAGGCCAAC CAAGCTCTGG ATTTAGCCAC TCAGCCGCCA
GCCGTGGTGA TGATGGCGGG TCTTCAAGGT GCGGGTAAAA CGACCAGCGT TGCCAAATTA
GGTAAGCTCC TGCGTACGCG CCATAAGAAA TCGGTTCTGG TCGTCAGTGC CGACGTTTAC
CGCCCTGCAG CGATTAAGCA GCTAGAAACC TTAGCGACCG AAGTCGATGT GGAGTTTTTC
CCATCGGATG TGAGCCAAAA GCCAATCGAT ATCGCCAAGG CGGCCATTGC CCACGCTAAG
CTTAAATTTA TCGATGTGGT GATCCTCGAC ACTGCGGGCC GTCTGCACGT CGATGAAGCC
ATGATGGATG AAATCAAGGC GTTGCACGCG GCGGTTAAGC CGATTGAGAC ACTGTTCGTG
GTCGATGCCA TGACGGGTCA AGACGCGGCA AACACGGCTA AAGCCTTTAA CGAAGCGCTG
CCGCTCACCG GTGTGATTTT AACTAAGGTC GACGGTGATG CGCGCGGCGG TGCGGCATTA
TCGATTCGTC ATATTACCGG CAAGCCGATT AAATTCCTCG GTGTTGGCGA GAAGACCGAT
GCCCTAGAGC CTTTCCATCC AGACCGTATC GCTTCACGTA TTCTCGGCAT GGGCGATGTA
TTATCGCTTA TCGAAGAAGT TGAGCGCGGT GTCGATAAAG ACAAAGCGAT GAAGCTGGCT
TCCAAAGTGA AGCAGGGCGG AAGTTTTGAT CTCGAAGATT TCCGCGAGCA GCTACAGCAG
ATGAAAAACA TGGGCGGCAT GATGAGCATG ATTGAAAAGC TGCCCGGTGT GGGTCAATTG
CCACCCGATG CCTTAGCGCA AATCCAAGAC GGTAAAATGA CCCGTCAAAT GGAAGCCATC
ATTAACTCAA TGACGGCCAA AGAGCGCAAA AACCCCGATT TAATCAAGGG CTCACGTAAG
CGCCGTATCG CTGCGGGTTC TGGCACACAA ATTCAAGACG TGAACCGTTT ATTGAAACAG
TTTACCCAAA TGCAAAAGAT GATGAAAAAG ATGTCGGCCA AGGGCGGCAT CCAGAAGATG
ATGCGCGGAA TGCGTGGCAT GATGCCTGGC GGCATGAAAT TTCCTGGCCG TTAA
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| Protein sequence | MFENLTDRLS RTLKNISGRG RLTEENVKET LREVRMALLE ADVALPVVRE FVNNVKERAV
GQEVAKSLSP GQAFIKIVQS ELEKSMGEAN QALDLATQPP AVVMMAGLQG AGKTTSVAKL
GKLLRTRHKK SVLVVSADVY RPAAIKQLET LATEVDVEFF PSDVSQKPID IAKAAIAHAK
LKFIDVVILD TAGRLHVDEA MMDEIKALHA AVKPIETLFV VDAMTGQDAA NTAKAFNEAL
PLTGVILTKV DGDARGGAAL SIRHITGKPI KFLGVGEKTD ALEPFHPDRI ASRILGMGDV
LSLIEEVERG VDKDKAMKLA SKVKQGGSFD LEDFREQLQQ MKNMGGMMSM IEKLPGVGQL
PPDALAQIQD GKMTRQMEAI INSMTAKERK NPDLIKGSRK RRIAAGSGTQ IQDVNRLLKQ
FTQMQKMMKK MSAKGGIQKM MRGMRGMMPG GMKFPGR
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