Gene Shewana3_3014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3014 
SymbolrplS 
ID4478557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3621687 
End bp3622040 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content45% 
IMG OID639727618 
Product50S ribosomal protein L19 
Protein accessionYP_870645 
Protein GI117921453 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0335] Ribosomal protein L19 
TIGRFAM ID[TIGR01024] ribosomal protein L19, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000550721 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACA TCATTAAAAT GCTCAACGAT GAGCAAATGA AACAAGACGT ACCTGCGTTT 
GGTGCTGGTG ATACAGTAGT AGTTCAGGTT CGTGTTAAAG AAGGTGATAA AGAGCGTTTA
CAGGCTTTCG AAGGCGTTGT AATTGCTAAA CGTAACCGTG GTCTGCACTC TGCATTCACA
GTACGTAAAA TCTCTAATGG CGAAGGTGTT GAGCGTGCAT TCCAAACGCA CAGCCCTCTG
ATCGCTAGCA TTGAAGTTAA GCGTCGTGGC CGCGTTCGTC GCGCCAAACT GTACTACTTA
CGTGATCGTT CAGGTAAATC TGCACGTATC CGTGAAAAGC TGGCTACTAA GTAA
 
Protein sequence
MNNIIKMLND EQMKQDVPAF GAGDTVVVQV RVKEGDKERL QAFEGVVIAK RNRGLHSAFT 
VRKISNGEGV ERAFQTHSPL IASIEVKRRG RVRRAKLYYL RDRSGKSARI REKLATK