| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3004 |
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| Symbol | |
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| ID | 4478547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3607755 |
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| End bp | 3608813 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639727608 |
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| Product | permease YjgP/YjgQ family protein |
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| Protein accession | YP_870635 |
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| Protein GI | 117921443 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000801817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTT TAGACCTTTA TATCGCCAGA GTTTTATTAA GTACTTCGGC GCTGTGTTTG
CTGGTGCTGA CGGGCTTGTC GGGCATCATT AAGTGGGTTG ACCAGCTGCG TTTAGTGGGG
CGTGGTTCCT ACACTATGAT GGATGCAGGC ATTTATGTGT TATTCCTCGT GCCTCGCGAT
ATTGAAATGT TTTTCCCGAT GGCGGTGCTG TTAGGCGCCT TGATCGGTAT GGGGATGCTG
GCCTCGAACT CTGAGCTAGT GGTGATGCAA GCCTCAGGGA TGTCGCGGTT GCAAATCACC
TTATCTGCGA TGAAAACCGC TGTGCCATTG ATGTTGATGG TGATGGCATT GGGTGAGTGG
GGCGCGCCAG TGGCCGAGCA AAAGGCCAAT GAACTCCAAG CTATTAAACT CTCCGGCGGC
AGTTTGATTA AATCCCACCG AGGCATTTGG GCGAAGGATG GTGATTTGTT CGTGAATATT
GGCGAAGTCG CCGATATTGA TAAGCTGAAT AATATTACTT TGTATAAGTT TAACAGTGAG
TTAAAGCTTA CAAATGTGGT GCATGCCAAG AGCGCTTTGT TCAGTAAGGA CAGCTGGCAT
CTTATGGATG TAAAGCGTAC TGACTTAAGC TATGACGAAG TGAAGCTCGA ACACTTAGAC
GAAGATATTT GGCGCTCAAG TCTTACGCCC GACAAACTCA GCGTAGTATC GGTCAAGCCA
GAGGCCTTAT CGATTCGCGG TTTAATGGGG TACTTAGATT ACCTTAAAAA TAATAGCCAA
GATCCAAGCC GTTATGAATT AGCCCTCTGG CGCAAGGTGA TGCAGCCTGT GACGGTTGGG
GTGATGATGC TGGTGGCCTT ATCTTTTGTG TTTGGACCGC TGCGGACAGT GACTATGGGG
GCGCGGGTGT TGCTTGGTGT GGTTGCCGGG TTTAGCTTCT ATATCAGTAA CGAGATCTTT
GGTCCCATGA GTATGGTATA TGAGTTGCCA GCCTACGTGG GGGCCATCGC GCCGAGTCTG
CTATTTACCG GTATTGCCTT TTACTTTATC CGGCGGTGA
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| Protein sequence | MKILDLYIAR VLLSTSALCL LVLTGLSGII KWVDQLRLVG RGSYTMMDAG IYVLFLVPRD
IEMFFPMAVL LGALIGMGML ASNSELVVMQ ASGMSRLQIT LSAMKTAVPL MLMVMALGEW
GAPVAEQKAN ELQAIKLSGG SLIKSHRGIW AKDGDLFVNI GEVADIDKLN NITLYKFNSE
LKLTNVVHAK SALFSKDSWH LMDVKRTDLS YDEVKLEHLD EDIWRSSLTP DKLSVVSVKP
EALSIRGLMG YLDYLKNNSQ DPSRYELALW RKVMQPVTVG VMMLVALSFV FGPLRTVTMG
ARVLLGVVAG FSFYISNEIF GPMSMVYELP AYVGAIAPSL LFTGIAFYFI RR
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